ISCW002449 (Ixodes scapularis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ISCW002449 T44818_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ISCW002449-PA RRM 9 79

Links

Other RRM family RBPs
Other Ixodes scapularis RBPs

84 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIBMGA003414 Bombyx mori BGIBMGA003414 N 0.915
PPIE Gallus gallus ENSGALG00000013383 N 0.901
amel4_ncbi_hmm1701 Apis mellifera amel4_ncbi_hmm1701 N 0.901
amel4_ncbi_hmm1701 Tribolium castaneum amel4_ncbi_hmm1701 N 0.901
estExt_fgenesh2_kg.C_sca_1160007 Lottia gigantea estExt_fgenesh2_kg.C_sca_1160007 N 0.901
PPIE Monodelphis domestica ENSMODG00000017659 N 0.901
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.901
amel4_ncbi_hmm44329 Apis mellifera amel4_ncbi_hmm44329 N 0.887
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.887
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.887
PPIE Loxodonta africana ENSLAFG00000028312 N 0.887
PPIE Homo sapiens ENSG00000084072 N 0.887
LOC100054084 Equus caballus ENSECAG00000008955 N 0.887
PPIE Canis familiaris ENSCAFG00000003031 N 0.887
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.887
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.887
PPIE Sus scrofa ENSSSCG00000003664 N 0.887
LOC100054282 Equus caballus ENSECAG00000024285 N 0.887
PPIE Microcebus murinus ENSMICG00000016676 N 0.887
Ppie Mus musculus ENSMUSG00000028651 N 0.887
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.887
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.887
PPIE Pan troglodytes ENSPTRG00000000577 N 0.887
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.887
PPIE Macaca mulatta ENSMMUG00000018869 N 0.887
PPIE Sorex araneus ENSSARG00000005703 N 0.887
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.887
PPIE Cavia porcellus ENSCPOG00000007365 N 0.875
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.873
PPIE Anolis carolinensis ENSACAG00000002688 N 0.873
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.873
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.873
PPIE Oryzias latipes ENSORLG00000017469 N 0.873
ppie Danio rerio ENSDARG00000059270 N 0.873
ENSPPYG00000001501 Pongo pygmaeus ENSPPYG00000001501 N 0.859
AAI23372 Xenopus laevis AAI23372 N 0.859
XP_001175534.1 Strongylocentrotus purpuratus XP_001175534.1 N 0.859
PPIE Gasterosteus aculeatus ENSGACG00000007165 N 0.859
XP_799104.2 Strongylocentrotus purpuratus XP_799104.2 N 0.859
Ame_R020475 Ailuropoda melanoleuca Ame_R020475 N 0.859
PHUM293600 Pediculus humanus PHUM293600 N 0.859
PPIE Felis catus ENSFCAG00000006027 N 0.845
estExt_gwp.C_1130042 Nematostella vectensis estExt_gwp.C_1130042 N 0.845
estExt_gwp.C_2960041 Branchiostoma floridae estExt_gwp.C_2960041 N 0.845
estExt_gwp.C_5080019 Branchiostoma floridae estExt_gwp.C_5080019 N 0.845
nasonia_NCBI_hmm78483 Nasonia vitripennis nasonia_NCBI_hmm78483 N 0.831
107863 Helobdella robusta 107863 N 0.831
ENSCING00000003116 Ciona intestinalis ENSCING00000003116 N 0.817
DGIL_AUG5s585g5t1 Acyrtosiphon pisum DGIL_AUG5s585g5t1 N 0.817
XP_002168022.1 Hydra magnipapillata XP_002168022.1 N 0.803
XP_002154334.1 Hydra magnipapillata XP_002154334.1 N 0.803
ENSCSAVG00000006547 Ciona savignyi ENSCSAVG00000006547 N 0.803
CAOG_01587 Capsaspora owczarzaki CAOG_01587 N 0.775
Ppa-cyn-13 Pristionchus pacificus PPA01466 N 0.775
estExt_fgeneshTA2_pm.C_70022 Trichoplax adhaerens estExt_fgeneshTA2_pm.C_70022 N 0.761
CBN02296 Caenorhabditis brenneri CBN02296 N 0.761
AGAP009810 Anopheles gambiae AGAP009810 N 0.761
Aqu1.226474 Amphimedon queenslandica Aqu1.226474 N 0.761
WUBG_08965 Wuchereria bancrofti WUBG_08965 N 0.761
LOAG_00807 Loa loa LOAG_00807 N 0.761
Bm1_52100 Brugia malayi Bm1_52100 N 0.761
PPIE Macropus eugenii ENSMEUG00000005090 N 0.750
PPIE Spermophilus tridecemlineatus ENSSTOG00000010445 N 0.746
CRE28739 Caenorhabditis remanei CRE28739 N 0.746
PPIE Erinaceus europaeus ENSEEUG00000010232 N 0.746
AAEL013948 Aedes aegypti AAEL013948 N 0.746
CBG00420 Caenorhabditis briggsae CBG00420 N 0.732
GE11871 Drosophila yakuba FBgn0229657 N 0.732
GL11464 Drosophila persimilis FBgn0149073 N 0.732
GK21899 Drosophila willistoni FBgn0223884 N 0.732
GA18502-RA Drosophila pseudoobscura FBgn0078504 N 0.732
CpipJ_CPIJ008841 Culex pipiens CpipJ_CPIJ008841 N 0.732
cyn-13 Caenorhabditis elegans Y116A8C.34 N 0.732
CPIJ008841 Culex quinquefasciatus CPIJ008841 N 0.732
CJA08769 Caenorhabditis japonica CJA08769 N 0.732
GD11288 Drosophila simulans FBgn0183037 N 0.718
GJ20579 Drosophila virilis FBgn0207718 N 0.718
GI20843 Drosophila mojavensis FBgn0143577 N 0.718
cyp33 Drosophila melanogaster FBgn0028382 N 0.718
GF11346 Drosophila ananassae FBgn0088386 N 0.718
GG21795 Drosophila erecta FBgn0113973 N 0.718
GH20760 Drosophila grimshawi FBgn0128223 N 0.718
Smp_094810 Schistosoma mansoni Smp_094810 N 0.704
GM21798 Drosophila sechellia FBgn0176676 N 0.704