TIA1 (Equus caballus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSECAG00000022361 T36703_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.766
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.766
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000020060 RRM 9 77
ENSECAP00000020060 RRM 108 161
ENSECAP00000020060 RRM 236 281

Links

Other RRM family RBPs
Other Equus caballus RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH77169 Xenopus laevis AAH77169 I 0.712
AAH80105 Xenopus laevis AAH80105 I 0.722
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.766
CAC95018 Xenopus laevis CAC95018 I 0.712
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.771
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.771
TIA1 Canis familiaris ENSCAFG00000003341 I 0.766
TIA1 Choloepus hoffmanni ENSCHOG00000003904 I 0.737
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.766
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.766
tia1 Danio rerio ENSDARG00000052536 I 0.717
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.766
Tia1 Dipodomys ordii ENSDORG00000008601 I 0.702
TIA1 Echinops telfairi ENSETEG00000010021 I 0.766
TIA1 Homo sapiens ENSG00000116001 D 0.766
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.766
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.771
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.761
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.766
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.771
Tia1 Mus musculus ENSMUSG00000071337 I 0.761
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.766
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.766
TIA1 Oryzias latipes ENSORLG00000015642 I 0.717
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.751
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.766
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.775
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.756
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.804
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.784
TIA1 Tetraodon nigroviridis ENSTNIG00000011433 I 0.712
TIA1 Takifugu rubripes ENSTRUG00000015136 I 0.712
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.766
TIA1 Vicugna pacos ENSVPAG00000007449 I 0.775
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.727