TIA1 (Vicugna pacos)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSVPAG00000007449 T42771_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.800
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.800
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000006930 RRM 9 77
ENSVPAP00000006930 RRM 108 178
ENSVPAP00000006930 RRM 253 278

Links

Other RRM family RBPs
Other Vicugna pacos RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TIA1 Microcebus murinus ENSMICG00000002434 I 0.873
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.826
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.819
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.809
TIA1 Echinops telfairi ENSETEG00000010021 I 0.805
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.805
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.805
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.805
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.805
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.800
TIA1 Homo sapiens ENSG00000116001 D 0.800
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.800
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.800
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.800
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.800
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.800
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.800
TIA1 Canis familiaris ENSCAFG00000003341 I 0.800
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.800
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.800
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.800
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.795
Tia1 Mus musculus ENSMUSG00000071337 I 0.795
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.795
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.785
TIA1 Equus caballus ENSECAG00000022361 I 0.775
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.756
TIA1 Tetraodon nigroviridis ENSTNIG00000011433 I 0.751
TIA1 Takifugu rubripes ENSTRUG00000015136 I 0.751
TIA1 Oryzias latipes ENSORLG00000015642 I 0.751
AAH80105 Xenopus laevis AAH80105 I 0.751
tia1 Danio rerio ENSDARG00000052536 I 0.751
AAH77169 Xenopus laevis AAH77169 I 0.741
CAC95018 Xenopus laevis CAC95018 I 0.741
Tia1 Dipodomys ordii ENSDORG00000008601 I 0.737
TIA1 Takifugu rubripes ENSTRUG00000005456 I 0.732
TIA1 Oryzias latipes ENSORLG00000002529 I 0.732
TIA1 Tetraodon nigroviridis ENSTNIG00000013470 I 0.732
TIA1 Gasterosteus aculeatus ENSGACG00000015800 I 0.727
ENSSSCG00000010685 Sus scrofa ENSSSCG00000010685 I 0.722
TIAL1 Macaca mulatta ENSMMUG00000001472 I 0.722
TIAL1 Equus caballus ENSECAG00000009970 I 0.722
TIAL1 Anolis carolinensis ENSACAG00000016986 I 0.722
TIAL1 Homo sapiens ENSG00000151923 D 0.722
Tial1 Mus musculus ENSMUSG00000030846 I 0.722
A1A4R7_BOVIN Bos taurus ENSBTAG00000004080 I 0.722
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.717
tial1 Danio rerio ENSDARG00000009525 I 0.707