tia1 (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000052536 T36166_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.937
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.937
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000068889 RRM 10 78
ENSDARP00000068889 RRM 98 168
ENSDARP00000068889 RRM 206 270

Links

Other RRM family RBPs
Other Danio rerio RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.937
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.937
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.937
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.937
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.937
TIA1 Homo sapiens ENSG00000116001 D 0.937
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.937
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.937
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.937
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.937
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.937
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.932
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.932
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.932
TIA1 Canis familiaris ENSCAFG00000003341 I 0.932
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.932
Tia1 Mus musculus ENSMUSG00000071337 I 0.932
TIA1 Takifugu rubripes ENSTRUG00000015136 I 0.932
TIA1 Tetraodon nigroviridis ENSTNIG00000011433 I 0.932
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.932
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.932
TIA1 Echinops telfairi ENSETEG00000010021 I 0.932
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.927
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.927
AAH80105 Xenopus laevis AAH80105 I 0.927
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.922
TIA1 Oryzias latipes ENSORLG00000015642 I 0.922
TIA1 Gasterosteus aculeatus ENSGACG00000015800 I 0.912
CAC95018 Xenopus laevis CAC95018 I 0.912
AAH77169 Xenopus laevis AAH77169 I 0.912
TIA1 Oryzias latipes ENSORLG00000002529 I 0.912
TIA1 Tetraodon nigroviridis ENSTNIG00000013470 I 0.902
TIA1 Takifugu rubripes ENSTRUG00000005456 I 0.902
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.888
TIA1 Gasterosteus aculeatus ENSGACG00000013294 I 0.883
Tia1 Dipodomys ordii ENSDORG00000008601 I 0.878
tial1 Danio rerio ENSDARG00000009525 I 0.863
A1A4R7_BOVIN Bos taurus ENSBTAG00000004080 I 0.849
Tial1 Mus musculus ENSMUSG00000030846 I 0.849
tia1l Danio rerio ENSDARG00000026476 I 0.849
TIAL1 Homo sapiens ENSG00000151923 D 0.849
TIAL1 Macaca mulatta ENSMMUG00000001472 I 0.849
TIAL1 Equus caballus ENSECAG00000009970 I 0.849
ENSSSCG00000010685 Sus scrofa ENSSSCG00000010685 I 0.849
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.844
TIAL1 Anolis carolinensis ENSACAG00000016986 I 0.839
TIAL1 Gasterosteus aculeatus ENSGACG00000003365 I 0.830
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.829
TIAL1 Oryzias latipes ENSORLG00000013798 I 0.815
TIA1 Sorex araneus ENSSARG00000001997 I 0.795
TIAL1 Callithrix jacchus ENSCJAG00000019682 I 0.784
TIAL1 Monodelphis domestica ENSMODG00000008865 I 0.784
TIAL1 Tarsius syrichta ENSTSYG00000004348 I 0.784
Tial1 Rattus norvegicus ENSRNOG00000020271 I 0.784
TIAL1 Pteropus vampyrus ENSPVAG00000017585 I 0.784
ENSPPYG00000002703 Pongo pygmaeus ENSPPYG00000002703 I 0.784
Q800W1_CHICK Gallus gallus ENSGALG00000009427 I 0.784
TIAL1 Canis familiaris ENSCAFG00000012171 I 0.784
TIAL1 Pan troglodytes ENSPTRG00000002996 I 0.784
TIAL1 Procavia capensis ENSPCAG00000003192 I 0.779
estExt_fgenesh2_pg.C_1430023 Branchiostoma floridae estExt_fgenesh2_pg.C_1430023 I 0.766
gw.406.24.1 Branchiostoma floridae gw.406.24.1 I 0.761
TIAL1 Vicugna pacos ENSVPAG00000001240 I 0.756
TIA1 Vicugna pacos ENSVPAG00000007449 I 0.751
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.750
Tial1 Dipodomys ordii ENSDORG00000010683 I 0.748
TIAL1 Ornithorhynchus anatinus ENSOANG00000004896 I 0.722
TIA1 Equus caballus ENSECAG00000022361 I 0.717
TIA1 Ochotona princeps ENSOPRG00000001066 I 0.702