CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Hnrnph3
(
Mus musculus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMUSG00000020069
T39251_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000020263
RRM
18
87
VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIE
ENSMUSP00000020263
RRM
197
264
VHMRGLPFRATENDIANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIE
ENSMUSP00000112424
RRM
18
87
VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIE
ENSMUSP00000112424
RRM
182
249
VHMRGLPFRATENDIANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIE
Links
Other
RRM
family RBPs
Other
Mus musculus
RBPs
49 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBG08763
Caenorhabditis briggsae
CBG08763
N
0.000
CJA00525
Caenorhabditis japonica
CJA00525
N
0.000
CJA02670
Caenorhabditis japonica
CJA02670
N
0.000
CJA02757
Caenorhabditis japonica
CJA02757
N
0.000
CJA03993
Caenorhabditis japonica
CJA03993
N
0.000
CJA05078
Caenorhabditis japonica
CJA05078
N
0.000
CJA07934
Caenorhabditis japonica
CJA07934
N
0.000
CJA09584
Caenorhabditis japonica
CJA09584
N
0.000
CJA10177
Caenorhabditis japonica
CJA10177
N
0.000
CJA11030
Caenorhabditis japonica
CJA11030
N
0.000
CJA12868
Caenorhabditis japonica
CJA12868
N
0.000
CJA13138
Caenorhabditis japonica
CJA13138
N
0.000
CJA13676
Caenorhabditis japonica
CJA13676
N
0.000
CJA14117
Caenorhabditis japonica
CJA14117
N
0.000
CJA15447
Caenorhabditis japonica
CJA15447
N
0.000
CJA15515
Caenorhabditis japonica
CJA15515
N
0.000
CJA17375
Caenorhabditis japonica
CJA17375
N
0.000
CJA17739
Caenorhabditis japonica
CJA17739
N
0.000
CJA18092
Caenorhabditis japonica
CJA18092
N
0.000
CJA21035
Caenorhabditis japonica
CJA21035
N
0.000
CJA21290
Caenorhabditis japonica
CJA21290
N
0.000
CJA23650
Caenorhabditis japonica
CJA23650
N
0.000
CJA26146
Caenorhabditis japonica
CJA26146
N
0.000
CJA27243
Caenorhabditis japonica
CJA27243
N
0.000
CJA28002
Caenorhabditis japonica
CJA28002
N
0.000
CJA28132
Caenorhabditis japonica
CJA28132
N
0.000
CJA29053
Caenorhabditis japonica
CJA29053
N
0.000
CRE03331
Caenorhabditis remanei
CRE03331
N
0.000
CRE06628
Caenorhabditis remanei
CRE06628
N
0.000
CRE09308
Caenorhabditis remanei
CRE09308
N
0.000
CRE13684
Caenorhabditis remanei
CRE13684
N
0.000
CRE19609
Caenorhabditis remanei
CRE19609
N
0.000
CRE30341
Caenorhabditis remanei
CRE30341
N
0.000