GJ12847 (Drosophila virilis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0200082 T44040_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0227264 RRM 103 144
FBpp0227264 RRM 200 264

Links

Other RRM family RBPs
Other Drosophila virilis RBPs

4 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29585.m000588 Ricinus communis 29585.m000588 N 0.000
29876.m000260 Ricinus communis 29876.m000260 N 0.000
AT5G02530 Arabidopsis thaliana AT5G02530-TAIR-G N 0.000
AT5G59950 Arabidopsis thaliana AT5G59950-TAIR-G N 0.000
BGIOSIBCE007269 Oryza indica BGIOSIBCE007269 N 0.000
BGIOSIBCE007271 Oryza indica BGIOSIBCE007271 N 0.000
BGIOSIBCE010579 Oryza indica BGIOSIBCE010579 N 0.000
BGIOSIBCE027930 Oryza indica BGIOSIBCE027930 N 0.000
BRADI1G66430 Brachypodium distachyon BRADI1G66430 N 0.000
BRADI3G36320 Brachypodium distachyon BRADI3G36320 N 0.000
BRADI4G45380 Brachypodium distachyon BRADI4G45380 N 0.000
cassava35480.valid.m1 Manihot esculenta cassava35480.valid.m1 N 0.000
cassava37746.valid.m1 Manihot esculenta cassava37746.valid.m1 N 0.000
cassava37747.valid.m1 Manihot esculenta cassava37747.valid.m1 N 0.000
cassava6599.valid.m1 Manihot esculenta cassava6599.valid.m1 N 0.000
Cucsa.172290 Cucumis sativus Cucsa.172290 N 0.000
Cucsa.213420 Cucumis sativus Cucsa.213420 N 0.000
ENSORLG00000001620 Oryzias latipes ENSORLG00000001620 N 0.000
estExt_fgenesh1_pg.C_3900014 Physcomitrella patens estExt_fgenesh1_pg.C_3900014 N 0.000
e_gw1.0.323.1 Selaginella moellendorfii e_gw1.0.323.1 N 0.000
e_gw1.4.224.1 Physcomitrella patens e_gw1.4.224.1 N 0.000
fgenesh1_pm.scaffold_57000010 Physcomitrella patens fgenesh1_pm.scaffold_57000010 N 0.000
XM_002873013.1 Arabidopsis lyrata fgenesh2_kg.6__165__AT5G02530.1 N 0.000
XM_002864614.1 Arabidopsis lyrata fgenesh2_kg.8__1946__AT5G59950.1 N 0.000
fgeneshTA2_pg.C_scaffold_2000899 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_2000899 N 0.000
Glyma02g10380.1 Glycine max Glyma02g10380.1 N 0.000
Glyma11g15040.1 Glycine max Glyma11g15040.1 N 0.000
Glyma12g07010.1 Glycine max Glyma12g07010.1 N 0.000
Glyma13g40930.1 Glycine max Glyma13g40930.1 N 0.000
GRMZM2G019251 Zea mays GRMZM2G019251 N 0.000
GRMZM2G140352 Zea mays GRMZM2G140352 N 0.000
GRMZM2G157329 Zea mays GRMZM2G157329 N 0.000
GRMZM2G166780 Zea mays GRMZM2G166780 N 0.000
GRMZM2G171921 Zea mays GRMZM2G171921 N 0.000
GSVIVG00016588001 Vitis vinifera GSVIVG00016588001 N 0.000
GSVIVG00025009001 Vitis vinifera GSVIVG00025009001 N 0.000
gw1.1.189.1 Selaginella moellendorfii gw1.1.189.1 N 0.000
LjT41B11.50.nd Lotus japonicus LjT41B11.50.nd N 0.000
LOC_Os03g17010 Oryza sativa LOC_Os03g17010 N 0.000
LOC_Os08g33120 Oryza sativa LOC_Os08g33120 N 0.000
LOC_Os11g01020 Oryza sativa LOC_Os11g01020 N 0.000
LOC_Os12g01010 Oryza sativa LOC_Os12g01010 N 0.000
MDP0000119945 Malus x domestica MDP0000119945 N 0.000
MDP0000153894 Malus x domestica MDP0000153894 N 0.000
MDP0000251188 Malus x domestica MDP0000251188 N 0.000
MDP0000320467 Malus x domestica MDP0000320467 N 0.000
Medtr4g078540 Medicago truncatula Medtr4g078540 N 0.000
mgf010207m Mimulus guttatus mgf010207m N 0.000
mgf013964m Mimulus guttatus mgf013964m N 0.000
B9GER3_POPTR Populus trichocarpa POPTR_0001s24350 N 0.000
B9HTL2_POPTR Populus trichocarpa POPTR_0010s21510 N 0.000
B9NB27_POPTR Populus trichocarpa POPTR_0016s11470 N 0.000
ppa010358m Prunus persica ppa010358m N 0.000
SB01G039330 Sorghum bicolor Sb01g039330 N 0.000
SB02G007020 Sorghum bicolor Sb02g007020 N 0.000
SB07G020860 Sorghum bicolor Sb07g020860 N 0.000
XP_002155396.1 Hydra magnipapillata XP_002155396.1 N 0.000