Glyma12g07010.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma12g07010.1 T52808_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma12g07010.1 RRM 91 160

Links

Other RRM family RBPs
Other Glycine max RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma11g15040.1 Glycine max Glyma11g15040.1 N 0.971
Glyma13g40930.1 Glycine max Glyma13g40930.1 N 0.943
Medtr4g078540 Medicago truncatula Medtr4g078540 N 0.943
ppa010358m Prunus persica ppa010358m N 0.914
mgf010207m Mimulus guttatus mgf010207m N 0.900
GSVIVG00025009001 Vitis vinifera GSVIVG00025009001 N 0.900
cassava37747.valid.m1 Manihot esculenta cassava37747.valid.m1 N 0.886
cassava37746.valid.m1 Manihot esculenta cassava37746.valid.m1 N 0.886
MDP0000153894 Malus x domestica MDP0000153894 N 0.886
MDP0000119945 Malus x domestica MDP0000119945 N 0.886
MDP0000251188 Malus x domestica MDP0000251188 N 0.886
29876.m000260 Ricinus communis 29876.m000260 N 0.871
XM_002873013.1 Arabidopsis lyrata fgenesh2_kg.6__165__AT5G02530.1 N 0.871
cassava35480.valid.m1 Manihot esculenta cassava35480.valid.m1 N 0.871
AT5G02530 Arabidopsis thaliana AT5G02530-TAIR-G N 0.871
Cucsa.172290 Cucumis sativus Cucsa.172290 N 0.871
e_gw1.4.224.1 Physcomitrella patens e_gw1.4.224.1 N 0.871
e_gw1.77.52.1 Physcomitrella patens e_gw1.77.52.1 N 0.857
GRMZM2G157329 Zea mays GRMZM2G157329 N 0.843
B9GER3_POPTR Populus trichocarpa POPTR_0001s24350 N 0.843
B9NB27_POPTR Populus trichocarpa POPTR_0016s11470 N 0.843
estExt_fgenesh1_pg.C_3900014 Physcomitrella patens estExt_fgenesh1_pg.C_3900014 N 0.829
SB01G039330 Sorghum bicolor Sb01g039330 N 0.829
fgenesh1_pm.scaffold_57000010 Physcomitrella patens fgenesh1_pm.scaffold_57000010 N 0.829
LOC_Os12g01010 Oryza sativa LOC_Os12g01010 N 0.829
AT5G59950 Arabidopsis thaliana AT5G59950-TAIR-G N 0.829
XM_002864614.1 Arabidopsis lyrata fgenesh2_kg.8__1946__AT5G59950.1 N 0.829
LOC_Os03g17010 Oryza sativa LOC_Os03g17010 N 0.814
GRMZM2G166780 Zea mays GRMZM2G166780 N 0.814
BGIOSIBCE010579 Oryza indica BGIOSIBCE010579 N 0.814
LOC_Os11g01020 Oryza sativa LOC_Os11g01020 N 0.800
BGIOSIBCE007269 Oryza indica BGIOSIBCE007269 N 0.800
Cucsa.213420 Cucumis sativus Cucsa.213420 N 0.800
BRADI4G45380 Brachypodium distachyon BRADI4G45380 N 0.800
BGIOSIBCE007271 Oryza indica BGIOSIBCE007271 N 0.800
SB07G020860 Sorghum bicolor Sb07g020860 N 0.786
GRMZM2G171921 Zea mays GRMZM2G171921 N 0.786
MDP0000320467 Malus x domestica MDP0000320467 N 0.786
cassava6599.valid.m1 Manihot esculenta cassava6599.valid.m1 N 0.771
B9HTL2_POPTR Populus trichocarpa POPTR_0010s21510 N 0.771
e_gw1.0.323.1 Selaginella moellendorfii e_gw1.0.323.1 N 0.771
LOC_Os08g33120 Oryza sativa LOC_Os08g33120 N 0.771
BGIOSIBCE027930 Oryza indica BGIOSIBCE027930 N 0.771
GSVIVG00016588001 Vitis vinifera GSVIVG00016588001 N 0.757
BRADI3G36320 Brachypodium distachyon BRADI3G36320 N 0.757
B9GUT0_POPTR Populus trichocarpa POPTR_0017s02890 N 0.743
BRADI1G66430 Brachypodium distachyon BRADI1G66430 N 0.743
cassava6246.valid.m1 Manihot esculenta cassava6246.valid.m1 N 0.729
cassava6245.valid.m1 Manihot esculenta cassava6245.valid.m1 N 0.729
cassava9472.m1 Manihot esculenta cassava9472.m1 N 0.729
cassava9473.m1 Manihot esculenta cassava9473.m1 N 0.729
mgf000319m Mimulus guttatus mgf000319m N 0.729
29005.m000257 Ricinus communis 29005.m000257 N 0.729
B9H3A7_POPTR Populus trichocarpa POPTR_0004s08540 N 0.729
GSVIVG00030785001 Vitis vinifera GSVIVG00030785001 N 0.729
cassava30010.valid.m1 Manihot esculenta cassava30010.valid.m1 N 0.714
LjT41B11.50.nd Lotus japonicus LjT41B11.50.nd N 0.714
cassava30011.valid.m1 Manihot esculenta cassava30011.valid.m1 N 0.714
PDK_20s1300711g001 Phoenix dactylifera PDK_20s1300711g001 N 0.714
mgf013964m Mimulus guttatus mgf013964m N 0.714
cassava30012.valid.m1 Manihot esculenta cassava30012.valid.m1 N 0.714
PK16300.1 Cannabis sativa PK16300.1 N 0.714
e_gw.5.817.1 Branchiostoma floridae e_gw.5.817.1 N 0.700
e_gw.394.68.1 Branchiostoma floridae e_gw.394.68.1 N 0.700
fgeneshTA2_pg.C_scaffold_2000899 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_2000899 N 0.700
ISCW001860 Ixodes scapularis ISCW001860 N 0.700
LjSGA_065336.1 Lotus japonicus LjSGA_065336.1 N 0.700
gw1.1.189.1 Selaginella moellendorfii gw1.1.189.1 N 0.700
MDP0000202749 Malus x domestica MDP0000202749 N 0.700
ppa009623m Prunus persica ppa009623m N 0.700
ppa014850m Prunus persica ppa014850m N 0.700
Cucsa.137040 Cucumis sativus Cucsa.137040 N 0.700