GK15864 (Drosophila willistoni)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0217867 T44191_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG7804
M137_0.6 		Drosophila melanogaster WGKRUGR RNAcompete
Ray et al.(2013)
RNCMPT00146 		0.738
TARDBP
M074_0.6 		Homo sapiens GAAUGD RNAcompete
Ray et al.(2013)
RNCMPT00076 		0.713
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0245007 RRM 109 177
FBpp0245007 RRM 194 246

Links

Other RRM family RBPs
Other Drosophila willistoni RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
170286 Helobdella robusta 170286 I 0.702
AGAP003497 Anopheles gambiae AGAP003497 N 0.740
amel4_ncbi_hmm11035 Apis mellifera amel4_ncbi_hmm11035 I 0.836
Ame_R011012 Ailuropoda melanoleuca Ame_R011012 I 0.713
BGIBMGA006832 Bombyx mori BGIBMGA006832 N 0.738
BGIBMGA007518 Bombyx mori BGIBMGA007518 N 0.732
BGIBMGA012007 Bombyx mori BGIBMGA012007 N 0.702
CPIJ014288 Culex quinquefasciatus CPIJ014288 N 0.724
CpipJ_CPIJ014288 Culex pipiens CpipJ_CPIJ014288 N 0.724
ENSACAG00000011709 Anolis carolinensis ENSACAG00000011709 I 0.713
Q2KJ45_BOVIN Bos taurus ENSBTAG00000003697 I 0.705
ENSCAFG00000016759 Canis familiaris ENSCAFG00000016759 I 0.713
LOC100405373 Callithrix jacchus ENSCJAG00000002381 I 0.705
TARDBP Cavia porcellus ENSCPOG00000011619 I 0.713
tardbpl Danio rerio ENSDARG00000004452 I 0.705
TARDBP Dasypus novemcinctus ENSDNOG00000008531 I 0.705
LOC100051482 Equus caballus ENSECAG00000008338 I 0.713
TARDBP Erinaceus europaeus ENSEEUG00000003755 I 0.713
TARDBP Echinops telfairi ENSETEG00000004358 I 0.713
TARDBP Felis catus ENSFCAG00000000050 I 0.705
TARDBP Homo sapiens ENSG00000120948 D 0.713
TARDBP Gasterosteus aculeatus ENSGACG00000012164 I 0.705
TADBP_CHICK Gallus gallus ENSGALG00000002906 I 0.705
TARDBP Loxodonta africana ENSLAFG00000014421 I 0.713
TARDBP Macropus eugenii ENSMEUG00000006548 I 0.713
TARDBP Meleagris gallopavo ENSMGAG00000004637 I 0.705
ENSMMUG00000007456 Macaca mulatta ENSMMUG00000007456 I 0.713
LOC100014246 Monodelphis domestica ENSMODG00000011233 I 0.713
TARDBP Ornithorhynchus anatinus ENSOANG00000013320 I 0.713
ENSOCUG00000004049 Oryctolagus cuniculus ENSOCUG00000004049 I 0.705
TARDBP Ochotona princeps ENSOPRG00000006352 I 0.705
TARDBP Oryzias latipes ENSORLG00000003593 I 0.713
TARDBP Procavia capensis ENSPCAG00000010442 I 0.705
ENSPPYG00000001894 Pongo pygmaeus ENSPPYG00000001894 I 0.713
XR_021519.1 Pan troglodytes ENSPTRG00000000136 I 0.713
TARDBP Tupaia belangeri ENSTBEG00000000263 I 0.713
TARDBP Taeniopygia guttata ENSTGUG00000003255 I 0.713
TARDBP Tetraodon nigroviridis ENSTNIG00000015173 I 0.705
TARDBP Tursiops truncatus ENSTTRG00000001312 I 0.713
TARDBP Vicugna pacos ENSVPAG00000009543 I 0.713
estExt_Genewise1Plus.C_8190002 Capitella teleta estExt_Genewise1Plus.C_8190002 I 0.702
e_gw1.17.468.1 Lottia gigantea e_gw1.17.468.1 I 0.707
TBPH Drosophila melanogaster FBgn0025790 I 0.951
CG7804 Drosophila melanogaster FBgn0036496 D 0.738
GA10247-RA Drosophila pseudoobscura FBgn0070305 I 0.975
GF12452 Drosophila ananassae FBgn0089489 I 0.967
GG19989 Drosophila erecta FBgn0112189 I 0.959
GH20198 Drosophila grimshawi FBgn0127662 I 0.975
GI20724 Drosophila mojavensis FBgn0143459 I 0.975
GL10927 Drosophila persimilis FBgn0148537 I 0.975
GM15502 Drosophila sechellia FBgn0170420 I 0.951
GD12565 Drosophila simulans FBgn0184292 I 0.713
GD25005 Drosophila simulans FBgn0196318 I 0.951
GJ21868 Drosophila virilis FBgn0208985 I 0.975
GE11522 Drosophila yakuba FBgn0229324 I 0.959
fgenesh1_pg.C_scaffold_6000249 Daphnia pulex fgenesh1_pg.C_scaffold_6000249 N 0.742
nasonia_NCBI_hmm274594 Nasonia vitripennis nasonia_NCBI_hmm274594 I 0.844
PHUM575260 Pediculus humanus PHUM575260 I 0.805