GSVIVG00024805001 (Vitis vinifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSVIVG00024805001 T44721_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00024805001 RRM 51 121

Links

Other RRM family RBPs
Other Vitis vinifera RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29751.m001798 Ricinus communis 29751.m001798 N 0.859
29784.m000370 Ricinus communis 29784.m000370 N 0.718
30190.m011248 Ricinus communis 30190.m011248 N 0.732
AT1G07350 Arabidopsis thaliana AT1G07350-TAIR-G N 0.746
BGIOSIBCE010473 Oryza indica BGIOSIBCE010473 N 0.789
BRADI1G67145 Brachypodium distachyon BRADI1G67145 N 0.761
cassava28819.valid.m1 Manihot esculenta cassava28819.valid.m1 N 0.746
cassava28820.valid.m1 Manihot esculenta cassava28820.valid.m1 N 0.746
cassava28821.valid.m1 Manihot esculenta cassava28821.valid.m1 N 0.746
Cucsa.146830 Cucumis sativus Cucsa.146830 N 0.761
XM_002892349.1 Arabidopsis lyrata fgenesh2_kg.1__710__AT1G07350.1 N 0.761
Glyma01g36670.1 Glycine max Glyma01g36670.1 N 0.704
Glyma08g45200.1 Glycine max Glyma08g45200.1 N 0.831
Glyma18g07500.1 Glycine max Glyma18g07500.1 N 0.845
GRMZM2G073567 Zea mays GRMZM2G073567 N 0.761
GSVIVG00005197001 Vitis vinifera GSVIVG00005197001 N 0.718
GSVIVG00019390001 Vitis vinifera GSVIVG00019390001 N 0.775
gw1.19.297.1 Selaginella moellendorfii gw1.19.297.1 N 0.732
LjB08M07.70.nc Lotus japonicus LjB08M07.70.nc N 0.845
LOC_Os03g15890 Oryza sativa LOC_Os03g15890 N 0.789
MDP0000140238 Malus x domestica MDP0000140238 N 0.761
MDP0000238655 Malus x domestica MDP0000238655 N 0.845
mg018590m Mimulus guttatus mg018590m N 0.789
mgf000980m Mimulus guttatus mgf000980m N 0.704
mgf010666m Mimulus guttatus mgf010666m N 0.704
mgf011871m Mimulus guttatus mgf011871m N 0.718
mgf018316m Mimulus guttatus mgf018316m N 0.704
PDK_20s1416111g002 Phoenix dactylifera PDK_20s1416111g002 N 0.718
PK05232.1 Cannabis sativa PK05232.1 N 0.718
PK25868.1 Cannabis sativa PK25868.1 N 0.859
B9GIV6_POPTR Populus trichocarpa POPTR_0001s25520 N 0.845
B9GWT8_POPTR Populus trichocarpa POPTR_0003s13030 N 0.789
B9HP82_POPTR Populus trichocarpa POPTR_0009s04640 N 0.859
ppa011480m Prunus persica ppa011480m N 0.746
Sb01g040100 Sorghum bicolor Sb01g040100 N 0.817