CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
TGME49_105010
(
Toxoplasma gondii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TGME49_105010
T47975_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TGME49_105010
RRM
54
121
IYVRNLPFKITDDELYDIFGKYGAVRQIRKGNTDKTRGSAFVVYEDVLDARAAVDQLSGFNVAGRYLI
Links
Other
RRM
family RBPs
Other
Toxoplasma gondii
RBPs
59 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC_Os03g26560
Oryza sativa
LOC_Os03g26560
N
0.000
LOC_Os03g33050
Oryza sativa
LOC_Os03g33050
N
0.000
LOC_Os04g19410
Oryza sativa
LOC_Os04g19410
N
0.000
LOC_Os04g29500
Oryza sativa
LOC_Os04g29500
N
0.000
LOC_Os05g17220
Oryza sativa
LOC_Os05g17220
N
0.000
LOC_Os05g17240
Oryza sativa
LOC_Os05g17240
N
0.000
LOC_Os05g39030
Oryza sativa
LOC_Os05g39030
N
0.000
LOC_Os09g04570
Oryza sativa
LOC_Os09g04570
N
0.000
LOC_Os12g14010
Oryza sativa
LOC_Os12g14010
N
0.000
LOC_Os12g18180
Oryza sativa
LOC_Os12g18180
N
0.000