NCLIV_001260 (Neospora caninum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 NCLIV_001260 T47140_0.6 EuPathDB (2010-Sep-21)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
NCLIV_001260 RRM 54 121

Links

Other RRM family RBPs
Other Neospora caninum RBPs

62 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TGVEG_106330 Toxoplasma gondii TGVEG_106330 N 0.985
TGME49_105010 Toxoplasma gondii TGME49_105010 N 0.985
TGGT1_042490 Toxoplasma gondii TGGT1_042490 N 0.985
fgenesh1_pm.C_scaffold_108000003 Phytophthora ramorum fgenesh1_pm.C_scaffold_108000003 N 0.765
chr2.CM0308.280.nc Lotus japonicus chr2.CM0308.280.nc N 0.750
s_454910 Phytophthora sojae s_454910 N 0.750
estExt_fgenesh1_pg.C_130126 Phytophthora capsici estExt_fgenesh1_pg.C_130126 N 0.750
PBANKA_143980 Plasmodium berghei PBANKA_143980 N 0.750
PITG_10282 Phytophthora infestans PITG_10282 N 0.750
GM13852 Drosophila sechellia FBgn0168783 N 0.735
GD13137 Drosophila simulans FBgn0184859 N 0.735
Medtr5g096400 Medicago truncatula Medtr5g096400 N 0.735
GF10910 Drosophila ananassae FBgn0087950 N 0.735
GH16287 Drosophila grimshawi FBgn0123758 N 0.735
GE20495 Drosophila yakuba FBgn0068445 N 0.735
GA12181-RA Drosophila pseudoobscura FBgn0072229 N 0.735
CG13298 Drosophila melanogaster FBgn0035692 N 0.735
GG14070 Drosophila erecta FBgn0106332 N 0.735
GI13232 Drosophila mojavensis FBgn0135989 N 0.735
GL22529 Drosophila persimilis FBgn0160121 N 0.735
GJ12004 Drosophila virilis FBgn0199256 N 0.735
estExt_fgenesh1_kg.C_20004 Daphnia pulex estExt_fgenesh1_kg.C_20004 N 0.735
e_gw1.13.49.1 Emiliania huxleyi e_gw1.13.49.1 N 0.735
mgf016428m Mimulus guttatus mgf016428m N 0.735
PCHAS_144180 Plasmodium chabaudi PCHAS_144180 N 0.735
GK17258 Drosophila willistoni FBgn0219257 N 0.735
Glyma02g44710.1 Glycine max Glyma02g44710.1 N 0.735
AAEL005909 Aedes aegypti AAEL005909 N 0.725
AGAP002780 Anopheles gambiae AGAP002780 N 0.725
CPIJ008576 Culex quinquefasciatus CPIJ008576 N 0.725
THAPSDRAFT_20086 Thalassiosira pseudonana Thaps20086 N 0.725
SPRG_00106 Saprolegnia parasitica SPRG_00106 N 0.725
BGIOSIBCE013412 Oryza indica BGIOSIBCE013412 N 0.725
CpipJ_CPIJ008576 Culex pipiens CpipJ_CPIJ008576 N 0.725
TA13725 Theileria annulata TA13725 N 0.725
LOC_Os03g59710 Oryza sativa LOC_Os03g59710 N 0.725
estExt_fgenesh2_pg.C_240194 Selaginella moellendorfii estExt_fgenesh2_pg.C_240194 N 0.725
PHATR_8132 Phaeodactylum tricornutum Phatr8132 N 0.725
XM_002873508.1 Arabidopsis lyrata scaffold_601250.1 N 0.721
Cucsa.086930 Cucumis sativus Cucsa.086930 N 0.721
AT5G12190 Arabidopsis thaliana AT5G12190-TAIR-G N 0.721
GSVIVG00037329001 Vitis vinifera GSVIVG00037329001 N 0.710
PHUM617060 Pediculus humanus PHUM617060 N 0.710
SB01G003790 Sorghum bicolor Sb01g003790 N 0.710
B9GG60_POPTR Populus trichocarpa POPTR_0001s28000 N 0.710
ppa013407m Prunus persica ppa013407m N 0.710
29868.m000351 Ricinus communis 29868.m000351 N 0.710
cassava30358.valid.m1 Manihot esculenta cassava30358.valid.m1 N 0.710
estExt_fgenesh1_pg.C_1580052 Nematostella vectensis estExt_fgenesh1_pg.C_1580052 N 0.710
PY07239 Plasmodium yoelii PY07239 N 0.710
PVX_123875 Plasmodium vivax PVX_123875 N 0.710
PFL1200c Plasmodium falciparum PFL1200c N 0.710
PKH_144160 Plasmodium knowlesi PKH_144160 N 0.710
estExt_Genewise1.C_630098 Physcomitrella patens estExt_Genewise1.C_630098 N 0.710
Glyma14g04020.1 Glycine max Glyma14g04020.1 N 0.710
MDP0000185506 Malus x domestica MDP0000185506 N 0.710
ppa013405m Prunus persica ppa013405m N 0.710
PK21780.1 Cannabis sativa PK21780.1 N 0.710
EDO06533.1 Babesia bovis EDO06533.1 N 0.710
GRMZM2G358416 Zea mays GRMZM2G358416 N 0.710
GRMZM2G107745 Zea mays GRMZM2G107745 N 0.710
LOAG_04189 Loa loa LOAG_04189 N 0.706