e_gw1.172.82.1 (Capitella teleta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.172.82.1 T49812_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
aret
M110_0.6 		Drosophila melanogaster UKUKUGU RNAcompete
Ray et al.(2013)
RNCMPT00114 		0.712
aret
M003_0.6 		Drosophila melanogaster UKUKUGU RNAcompete
Ray et al.(2013)
RNCMPT00003 		0.712
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.172.82.1 RRM 18 87
e_gw1.172.82.1 RRM 106 175
e_gw1.172.82.1 RRM 378 448

Links

Other RRM family RBPs
Other Capitella teleta RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAB09041 Xenopus laevis AAB09041 N 0.705
AAH45035 Xenopus laevis AAH45035 N 0.705
Ame_R017712 Ailuropoda melanoleuca Ame_R017712 N 0.705
CELF2 Anolis carolinensis ENSACAG00000007661 N 0.705
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.705
CELF2 Canis familiaris ENSCAFG00000004973 N 0.705
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.705
CELF2 Cavia porcellus ENSCPOG00000012567 N 0.705
CELF2 Equus caballus ENSECAG00000006649 N 0.705
CELF2 Erinaceus europaeus ENSEEUG00000005658 N 0.705
CELF2 Homo sapiens ENSG00000048740 N 0.705
CELF2 Gasterosteus aculeatus ENSGACG00000004426 N 0.700
CELF2_CHICK Gallus gallus ENSGALG00000006713 N 0.705
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.705
CELF2 Loxodonta africana ENSLAFG00000013612 N 0.705
CELF2 Microcebus murinus ENSMICG00000007867 N 0.705
CELF2 Macaca mulatta ENSMMUG00000011468 N 0.705
Celf2 Mus musculus ENSMUSG00000002107 N 0.705
CELF2 Oryctolagus cuniculus ENSOCUG00000004961 N 0.705
CELF2 Ochotona princeps ENSOPRG00000011502 N 0.705
CELF2 Oryzias latipes ENSORLG00000003894 N 0.714
ENSPPYG00000002083 Pongo pygmaeus ENSPPYG00000002083 N 0.705
CELF2 Pan troglodytes ENSPTRG00000002284 N 0.705
Cugbp2 Rattus norvegicus ENSRNOG00000023661 N 0.705
CELF2 Tupaia belangeri ENSTBEG00000007939 N 0.705
CUGBP2-1 Taeniopygia guttata ENSTGUG00000002136 N 0.705
CELF2 Tetraodon nigroviridis ENSTNIG00000016009 N 0.724
CELF2 Takifugu rubripes ENSTRUG00000016905 N 0.719
celf2 Xenopus tropicalis ENSXETG00000021992 N 0.705
estExt_fgenesh1_pg.C_870134 Daphnia pulex estExt_fgenesh1_pg.C_870134 N 0.759
e_gw.91.28.1 Branchiostoma floridae e_gw.91.28.1 I 0.756
e_gw1.31.79.1 Lottia gigantea e_gw1.31.79.1 N 0.848
aret Drosophila melanogaster FBgn0000114 D 0.708
GF14192 Drosophila ananassae FBgn0091219 I 0.712
GG23776 Drosophila erecta FBgn0115915 I 0.708
GH11642 Drosophila grimshawi FBgn0119122 I 0.703
GH11645 Drosophila grimshawi FBgn0119125 I 0.739
GL18624 Drosophila persimilis FBgn0156225 I 0.744
GM26763 Drosophila sechellia FBgn0181616 I 0.708
GD23828 Drosophila simulans FBgn0195198 I 0.708
GJ17715 Drosophila virilis FBgn0204884 I 0.708
GJ17718 Drosophila virilis FBgn0204887 I 0.735
GK15493 Drosophila willistoni FBgn0217498 I 0.703
GK15495 Drosophila willistoni FBgn0217500 I 0.739
GE18580 Drosophila yakuba FBgn0235987 I 0.708
GA25725-RB Drosophila pseudoobscura FBgn0247102 I 0.717
FBgn0262475 Drosophila melanogaster FBgn0262475 I 0.744
Q7ZXE2 Xenopus laevis Q7ZXE2 N 0.705