CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF2
(
Oryzias latipes
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSORLG00000003894
T40111_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000004864
RRM
48
119
MFVGQIPRSWTETELKELFEPFGAVYQINILRDRAQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLSGMH
ENSORLP00000004864
RRM
140
209
LFIGMVSKKYGENEVRMMFSSFGQIEECRILRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMMTNTM
ENSORLP00000004864
RRM
452
522
LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Oryzias latipes
RBPs
87 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF2
Tetraodon nigroviridis
ENSTNIG00000016009
N
0.939
CELF2
Gasterosteus aculeatus
ENSGACG00000004426
N
0.934
CELF2
Takifugu rubripes
ENSTRUG00000016905
N
0.934
CELF2
Takifugu rubripes
ENSTRUG00000010147
N
0.893
CELF2
Tetraodon nigroviridis
ENSTNIG00000007201
N
0.893
CELF2
Erinaceus europaeus
ENSEEUG00000005658
N
0.892
CELF2
Homo sapiens
ENSG00000048740
N
0.892
CELF2
Oryctolagus cuniculus
ENSOCUG00000004961
N
0.892
ENSPPYG00000002083
Pongo pygmaeus
ENSPPYG00000002083
N
0.892
CELF2
Equus caballus
ENSECAG00000006649
N
0.892
CELF2
Cavia porcellus
ENSCPOG00000012567
N
0.892
CELF2
Anolis carolinensis
ENSACAG00000007661
N
0.892
CELF2
Canis familiaris
ENSCAFG00000004973
N
0.892
LOC100391960
Callithrix jacchus
ENSCJAG00000020663
I
0.892
CELF2
Pan troglodytes
ENSPTRG00000002284
N
0.892
Celf2
Mus musculus
ENSMUSG00000002107
N
0.892
CELF2
Loxodonta africana
ENSLAFG00000013612
N
0.892
Cugbp2
Rattus norvegicus
ENSRNOG00000023661
N
0.892
CELF2
Microcebus murinus
ENSMICG00000007867
N
0.892
CELF2
Macaca mulatta
ENSMMUG00000011468
N
0.892
CELF2
Ochotona princeps
ENSOPRG00000011502
N
0.892
CELF2
Gorilla gorilla
ENSGGOG00000009330
I
0.892
Ame_R017712
Ailuropoda melanoleuca
Ame_R017712
N
0.892
CELF2_CHICK
Gallus gallus
ENSGALG00000006713
N
0.892
CUGBP2-1
Taeniopygia guttata
ENSTGUG00000002136
N
0.892
CELF2
Tupaia belangeri
ENSTBEG00000007939
N
0.892
celf2
Danio rerio
ENSDARG00000002131
N
0.888
AAB09041
Xenopus laevis
AAB09041
N
0.887
AAH45035
Xenopus laevis
AAH45035
N
0.887
celf2
Xenopus tropicalis
ENSXETG00000021992
N
0.887
Q7ZXE2
Xenopus laevis
Q7ZXE2
N
0.887
Q2KI16_BOVIN
Bos taurus
ENSBTAG00000008937
I
0.869
ACH69783
Xenopus laevis
ACH69783
N
0.853
CELF1
Monodelphis domestica
ENSMODG00000019913
N
0.850
CELF1
Macropus eugenii
ENSMEUG00000007763
N
0.850
CELF1
Anolis carolinensis
ENSACAG00000002114
N
0.850
CUGBP1
Taeniopygia guttata
ENSTGUG00000010377
N
0.845
CELF1_CHICK
Gallus gallus
ENSGALG00000008097
N
0.845
CELF1
Homo sapiens
ENSG00000149187
N
0.845
CELF1
Equus caballus
ENSECAG00000007741
N
0.845
CELF1
Vicugna pacos
ENSVPAG00000000336
N
0.845
Celf1
Dipodomys ordii
ENSDORG00000013721
N
0.845
CELF1
Loxodonta africana
ENSLAFG00000003484
N
0.845
CELF1
Oryctolagus cuniculus
ENSOCUG00000001311
N
0.845
CELF1
Macaca mulatta
ENSMMUG00000011657
N
0.845
CELF1
Ornithorhynchus anatinus
ENSOANG00000007896
N
0.845
Cugbp1
Rattus norvegicus
ENSRNOG00000010379
N
0.845
CELF1
Cavia porcellus
ENSCPOG00000007871
N
0.845
CELF1
Meleagris gallopavo
ENSMGAG00000010629
N
0.845
Celf1
Mus musculus
ENSMUSG00000005506
N
0.845
CELF1
Tursiops truncatus
ENSTTRG00000014157
N
0.845
Ame_R009875
Ailuropoda melanoleuca
Ame_R009875
N
0.845
CELF1
Canis familiaris
ENSCAFG00000008452
N
0.845
A7MB95_BOVIN
Bos taurus
ENSBTAG00000002520
N
0.845
LOC100392717
Callithrix jacchus
ENSCJAG00000020133
N
0.845
CELF2
Choloepus hoffmanni
ENSCHOG00000002945
N
0.836
O57406
Xenopus laevis
O57406
N
0.836
celf1
Xenopus tropicalis
ENSXETG00000009044
N
0.836
ENSPPYG00000003302
Pongo pygmaeus
ENSPPYG00000003302
N
0.836
AAI08575
Xenopus laevis
AAI08575
N
0.836
AAC41243
Xenopus laevis
AAC41243
N
0.836
CELF1
Ochotona princeps
ENSOPRG00000003239
N
0.831
CELF1
Takifugu rubripes
ENSTRUG00000001711
N
0.826
Q6PF35
Xenopus laevis
Q6PF35
N
0.822
AAH70706
Xenopus laevis
AAH70706
N
0.822
AAH57743
Xenopus laevis
AAH57743
N
0.822
celf1
Danio rerio
ENSDARG00000005315
N
0.817
CELF1
Procavia capensis
ENSPCAG00000002631
N
0.812
CELF1
Microcebus murinus
ENSMICG00000007157
N
0.803
e_gw.91.28.1
Branchiostoma floridae
e_gw.91.28.1
I
0.746
CELF1
Pan troglodytes
ENSPTRG00000003568
N
0.746
CELF1
Sorex araneus
ENSSARG00000003207
N
0.746
CELF1
Erinaceus europaeus
ENSEEUG00000009782
N
0.746
CELF2
Procavia capensis
ENSPCAG00000010882
N
0.746
CELF2
Oryzias latipes
ENSORLG00000017111
N
0.743
CELF1
Gasterosteus aculeatus
ENSGACG00000014226
N
0.743
CELF2
Macropus eugenii
ENSMEUG00000015276
N
0.742
CELF1
Dasypus novemcinctus
ENSDNOG00000009523
N
0.732
CELF2
Monodelphis domestica
ENSMODG00000016763
N
0.728
CELF2
Tursiops truncatus
ENSTTRG00000014665
N
0.728
Celf2
Dipodomys ordii
ENSDORG00000006455
N
0.724
e_gw1.172.82.1
Capitella teleta
e_gw1.172.82.1
I
0.714
CELF2
Tarsius syrichta
ENSTSYG00000005118
N
0.714
CELF2
Vicugna pacos
ENSVPAG00000009360
N
0.714
CELF1
Tupaia belangeri
ENSTBEG00000005140
N
0.714
CELF1
Myotis lucifugus
ENSMLUG00000016631
N
0.706
CELF1
Choloepus hoffmanni
ENSCHOG00000004196
N
0.706