GRMZM2G005459 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G005459 T53997_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G005459_P01 RRM 34 102
GRMZM2G005459_P01 RRM 122 193
GRMZM2G005459_P01 RRM 369 439

Links

Other RRM family RBPs
Other Zea mays RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29647.m002041 Ricinus communis 29647.m002041 N 0.775
AtRBP-DR1 Arabidopsis thaliana AT4G03110-TAIR-G N 0.729
BGIOSIBCE018791 Oryza indica BGIOSIBCE018791 N 0.808
BRADI2G27260 Brachypodium distachyon BRADI2G27260 N 0.850
BRADI2G60300 Brachypodium distachyon BRADI2G60300 N 0.864
cassava24659.valid.m1 Manihot esculenta cassava24659.valid.m1 N 0.779
cassava29564.valid.m1 Manihot esculenta cassava29564.valid.m1 N 0.779
Cucsa.084710 Cucumis sativus Cucsa.084710 N 0.728
XM_002872750.1 Arabidopsis lyrata fgenesh2_kg.6__3385__AT4G03110.1 N 0.732
Glyma02g17090.1 Glycine max Glyma02g17090.1 N 0.751
Glyma03g36650.1 Glycine max Glyma03g36650.1 N 0.784
Glyma10g02700.1 Glycine max Glyma10g02700.1 N 0.751
Glyma19g39300.1 Glycine max Glyma19g39300.1 N 0.779
GRMZM2G177001 Zea mays GRMZM2G177001 N 0.831
GSVIVG00011013001 Vitis vinifera GSVIVG00011013001 N 0.784
LOC_Os01g71200 Oryza sativa LOC_Os01g71200 N 0.873
LOC_Os05g30980 Oryza sativa LOC_Os05g30980 N 0.831
MDP0000123673 Malus x domestica MDP0000123673 N 0.788
MDP0000138865 Malus x domestica MDP0000138865 N 0.790
mgf007780m Mimulus guttatus mgf007780m N 0.746
PK12631.1 Cannabis sativa PK12631.1 N 0.770
B9GTC1_POPTR Populus trichocarpa POPTR_0002s22730 N 0.756
B9I9Y4_POPTR Populus trichocarpa POPTR_0014s13070 N 0.756
ppa006027m Prunus persica ppa006027m N 0.775
Sb03g045340 Sorghum bicolor Sb03g045340 N 0.953
SB09G018610 Sorghum bicolor Sb09g018610 N 0.845