Sb03g045340 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb03g045340 T45968_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb03g045340.1 RRM 34 103
Sb03g045340.1 RRM 122 193
Sb03g045340.1 RRM 369 439
Sb03g045340.2 RRM 1 53
Sb03g045340.2 RRM 72 143
Sb03g045340.2 RRM 319 389

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G005459 Zea mays GRMZM2G005459 N 0.953
LOC_Os01g71200 Oryza sativa LOC_Os01g71200 N 0.897
BRADI2G60300 Brachypodium distachyon BRADI2G60300 N 0.869
BRADI2G27260 Brachypodium distachyon BRADI2G27260 N 0.864
GRMZM2G177001 Zea mays GRMZM2G177001 N 0.854
SB09G018610 Sorghum bicolor Sb09g018610 N 0.850
LOC_Os05g30980 Oryza sativa LOC_Os05g30980 N 0.850
BGIOSIBCE018791 Oryza indica BGIOSIBCE018791 N 0.826
Glyma03g36650.1 Glycine max Glyma03g36650.1 N 0.808
MDP0000138865 Malus x domestica MDP0000138865 N 0.804
GSVIVG00011013001 Vitis vinifera GSVIVG00011013001 N 0.803
MDP0000123673 Malus x domestica MDP0000123673 N 0.803
29647.m002041 Ricinus communis 29647.m002041 N 0.803
cassava24659.valid.m1 Manihot esculenta cassava24659.valid.m1 N 0.798
cassava29564.valid.m1 Manihot esculenta cassava29564.valid.m1 N 0.798
ppa006027m Prunus persica ppa006027m N 0.798
Glyma19g39300.1 Glycine max Glyma19g39300.1 N 0.798
PK12631.1 Cannabis sativa PK12631.1 N 0.798
B9I9Y4_POPTR Populus trichocarpa POPTR_0014s13070 N 0.775
B9GTC1_POPTR Populus trichocarpa POPTR_0002s22730 N 0.775
mgf007780m Mimulus guttatus mgf007780m N 0.770
Glyma02g17090.1 Glycine max Glyma02g17090.1 N 0.765
Glyma10g02700.1 Glycine max Glyma10g02700.1 N 0.761
Cucsa.084710 Cucumis sativus Cucsa.084710 N 0.751
AtRBP-DR1 Arabidopsis thaliana AT4G03110-TAIR-G N 0.729
XM_002872750.1 Arabidopsis lyrata fgenesh2_kg.6__3385__AT4G03110.1 N 0.729