BGIOSIBCE018791 (Oryza indica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BGIOSIBCE018791 T32994_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE018791 RRM 48 117
BGIOSIBCE018791 RRM 136 207
BGIOSIBCE018791 RRM 382 451

Links

Other RRM family RBPs
Other Oryza indica RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os05g30980 Oryza sativa LOC_Os05g30980 N 0.977
BRADI2G27260 Brachypodium distachyon BRADI2G27260 N 0.911
SB09G018610 Sorghum bicolor Sb09g018610 N 0.864
LOC_Os01g71200 Oryza sativa LOC_Os01g71200 N 0.864
GRMZM2G177001 Zea mays GRMZM2G177001 N 0.854
BRADI2G60300 Brachypodium distachyon BRADI2G60300 N 0.850
Sb03g045340 Sorghum bicolor Sb03g045340 N 0.826
GRMZM2G005459 Zea mays GRMZM2G005459 N 0.808
GSVIVG00011013001 Vitis vinifera GSVIVG00011013001 N 0.808
Glyma19g39300.1 Glycine max Glyma19g39300.1 N 0.803
Glyma03g36650.1 Glycine max Glyma03g36650.1 N 0.803
PK12631.1 Cannabis sativa PK12631.1 N 0.784
cassava29564.valid.m1 Manihot esculenta cassava29564.valid.m1 N 0.784
B9GTC1_POPTR Populus trichocarpa POPTR_0002s22730 N 0.784
29647.m002041 Ricinus communis 29647.m002041 N 0.784
B9I9Y4_POPTR Populus trichocarpa POPTR_0014s13070 N 0.784
MDP0000138865 Malus x domestica MDP0000138865 N 0.780
cassava24659.valid.m1 Manihot esculenta cassava24659.valid.m1 N 0.775
Glyma10g02700.1 Glycine max Glyma10g02700.1 N 0.765
ppa006027m Prunus persica ppa006027m N 0.765
MDP0000123673 Malus x domestica MDP0000123673 N 0.756
Glyma02g17090.1 Glycine max Glyma02g17090.1 N 0.756
mgf007780m Mimulus guttatus mgf007780m N 0.756
Cucsa.084710 Cucumis sativus Cucsa.084710 N 0.742
AtRBP-DR1 Arabidopsis thaliana AT4G03110-TAIR-G N 0.729
XM_002872750.1 Arabidopsis lyrata fgenesh2_kg.6__3385__AT4G03110.1 N 0.724