PCBP4 (Oryzias latipes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSORLG00000003061 T19276_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.730
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000003821 KH 6 63
ENSORLP00000003821 KH 90 153
ENSORLP00000003821 KH 253 315

Links

Other KH family RBPs
Other Oryzias latipes RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.741
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.725
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.725
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.725
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.725
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.720
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.725
PCBP4 Monodelphis domestica ENSMODG00000011790 I 0.000
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.725
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.725
PCBP4 Homo sapiens ENSG00000090097 I 0.725
LOC100060660 Equus caballus ENSECAG00000024218 I 0.725
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.720
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.725
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.725
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.725
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.714
PCBP4 Loxodonta africana ENSLAFG00000010732 N 0.000