ENSGACG00000003044 (Gasterosteus aculeatus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSGACG00000003044 T18823_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.795
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.758
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.758
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.737
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.737
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000003997 KH 15 76
ENSGACP00000003997 KH 100 163
ENSGACP00000003997 KH 248 310

Links

Other KH family RBPs
Other Gasterosteus aculeatus RBPs

109 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.958
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.932
PCBP3 Gallus gallus ENSGALG00000013155 I 0.832
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.832
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.826
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.795
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.795
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.795
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.795
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.795
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.795
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.795
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.795
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.795
LOC100050101 Equus caballus ENSECAG00000012413 I 0.795
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.795
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.795
PCBP3 Homo sapiens ENSG00000183570 I 0.795
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.795
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.784
PCBP3 Gallus gallus ENSGALG00000004394 I 0.784
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.784
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.784
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.779
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.779
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.774
AAH84195 Xenopus laevis AAH84195 I 0.763
AAH41241 Xenopus laevis AAH41241 I 0.763
CAB50743 Xenopus laevis CAB50743 I 0.763
CAD29864 Xenopus laevis CAD29864 I 0.763
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.763
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.763
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.763
PCBP2 Homo sapiens ENSG00000197111 D 0.758
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.758
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.758
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.758
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.758
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.758
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.758
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.758
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.758
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.758
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.758
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.758
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.758
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.758
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.758
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.758
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.758
PCBP2 Equus caballus ENSECAG00000022389 I 0.758
pcbp2 Danio rerio ENSDARG00000013184 D 0.758
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.758
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.758
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.758
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.753
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.753
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.753
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.747
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.747
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.747
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.746
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.746
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.746
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.743
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.742
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.741
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.741
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.741
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.737
PCBP1 Homo sapiens ENSG00000169564 D 0.737
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.737
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.737
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.737
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.737
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.737
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.737
LOC100050579 Equus caballus ENSECAG00000002544 I 0.737
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.737
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.737
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.737
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.737
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.735
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.726
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.725
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.721
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.721
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.720
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.720
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.720
LOC100060660 Equus caballus ENSECAG00000024218 I 0.720
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.720
PCBP4 Homo sapiens ENSG00000090097 I 0.720
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.720
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.720
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.720
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.720
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.720
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.720
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.716
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.716
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.716
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.714
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.711
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.709
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.705
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.705
PCBP4 Oryzias latipes ENSORLG00000003061 I 0.704
pcbp3 Danio rerio ENSDARG00000054378 I 0.700