PCBP4 (Oryzias latipes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSORLG00000003061 T19276_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.730
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000003821 KH 6 63
ENSORLP00000003821 KH 90 153
ENSORLP00000003821 KH 253 315

Links

Other KH family RBPs
Other Oryzias latipes RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.824
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.824
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.814
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.746
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.741
PCBP3 Gallus gallus ENSGALG00000013155 I 0.741
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.735
LOC100050101 Equus caballus ENSECAG00000012413 I 0.730
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.730
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.730
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.730
PCBP3 Homo sapiens ENSG00000183570 I 0.730
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.730
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.730
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.730
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.730
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.730
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.730
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.730
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.730
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.725
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.725
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.725
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.725
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.725
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.725
PCBP4 Homo sapiens ENSG00000090097 I 0.725
LOC100060660 Equus caballus ENSECAG00000024218 I 0.725
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.725
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.725
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.725
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.725
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.725
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.720
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.720
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.720
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.720
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.714
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.714
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.714
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.714
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.714
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.711
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.704
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.704
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.704
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.704