PCBP4 (Anolis carolinensis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSACAG00000011701 T18418_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.774
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.721
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.721
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.711
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.711
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000011648 KH 18 78
ENSACAP00000011648 KH 102 165
ENSACAP00000011648 KH 248 310

Links

Other KH family RBPs
Other Anolis carolinensis RBPs

102 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.952
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.947
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.941
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.941
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.941
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.941
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.941
LOC100060660 Equus caballus ENSECAG00000024218 I 0.941
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.941
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.941
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.941
PCBP4 Homo sapiens ENSG00000090097 I 0.941
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.941
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.941
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.936
PCBP4 Monodelphis domestica ENSMODG00000011790 I 0.899
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.805
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.804
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.804
PCBP3 Gallus gallus ENSGALG00000013155 I 0.800
PCBP4 Loxodonta africana ENSLAFG00000010732 N 0.798
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.795
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.794
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.774
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.774
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.774
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.774
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.774
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.774
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.774
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.774
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.774
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.774
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.774
LOC100050101 Equus caballus ENSECAG00000012413 I 0.774
PCBP3 Homo sapiens ENSG00000183570 I 0.774
D3ZWQ9_RAT Rattus norvegicus ENSRNOG00000038946 N 0.772
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.768
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.763
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.763
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.758
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.758
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.758
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.753
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.753
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.747
PCBP3 Gallus gallus ENSGALG00000004394 I 0.747
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.746
PCBP4 Oryzias latipes ENSORLG00000003061 I 0.741
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.741
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.728
AAH84195 Xenopus laevis AAH84195 I 0.726
AAH41241 Xenopus laevis AAH41241 I 0.726
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.726
CAD29864 Xenopus laevis CAD29864 I 0.726
CAB50743 Xenopus laevis CAB50743 I 0.726
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.725
pcbp2 Danio rerio ENSDARG00000013184 D 0.721
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.721
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.721
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.721
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.721
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.721
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.721
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.721
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.721
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.721
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.721
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.721
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.721
PCBP2 Homo sapiens ENSG00000197111 D 0.721
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.721
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.721
PCBP2 Equus caballus ENSECAG00000022389 I 0.721
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.721
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.721
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.721
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.721
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.721
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.716
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.716
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.716
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.711
PCBP1 Homo sapiens ENSG00000169564 D 0.711
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.711
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.711
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.711
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.711
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.711
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.711
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.711
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.711
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.711
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.711
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.711
LOC100050579 Equus caballus ENSECAG00000002544 I 0.711
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.711
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.711
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.705
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.705
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.700
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.700