CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DEHA0A07766g
(
Debaryomyces hansenii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
DEHA0A07766g
T29157_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
DEHA0A07766g.1
RRM
171
241
IVIKNIPFAIKKEQLLDVMTKLNLPLPYAFNYHFDNGVFRGLAFANFTLTDETSSVVGLLNGREIGGRKLR
Links
Other
RRM
family RBPs
Other
Debaryomyces hansenii
RBPs
59 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZYRO0B02860g
Zygosaccharomyces rouxii
ZYRO0B02860g
N
0.845
A7TQD0_VANPO
Vanderwaltozyma polyspora
A7TQD0_VANPO
N
0.746
A7TMV9_VANPO
Vanderwaltozyma polyspora
A7TMV9_VANPO
N
0.803
539_YBL051C
Saccharomyces paradoxus
539_YBL051C
N
0.746
1510_YBL051C
Saccharomyces mikatae
1510_YBL051C
N
0.746
1078_YHR132C
Saccharomyces bayanus
1078_YHR132C
N
0.746
Skud_Contig1725.4
Saccharomyces kudriavzevii
Skud_Contig1725.4
N
0.746
Scas_Contig500.6
Saccharomyces castellii
Scas_Contig500.6
N
0.831
EAT83231.2
Phaeosphaeria nodorum
EAT83231.2
N
0.746
estExt_fgenesh1_pm.C_190004
Cochliobolus heterostrophus C5
estExt_fgenesh1_pm.C_190004
N
0.732
estExt_fgenesh1_pg.C_chr_8.10303
Pichia stipitis
estExt_fgenesh1_pg.C_chr_8.10303
N
0.930
estExt_fgenesh1_pg.C_chr_80368
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_80368
N
0.746
e_gw1.5.456.1
Mycosphaerella fijiensis
e_gw1.5.456.1
N
0.718
AB09303.1
Alternaria brassicicola
AB09303.1
N
0.732
ACR235W
Ashbya gossypii
ACR235W
N
0.817
CAGL0A04213g
Candida glabrata
CAGL0A04213g
N
0.732
YALI0D15752g
Yarrowia lipolytica
YALI0D15752g
N
0.887
XP_002491986.1
Pichia pastoris
XP_002491986.1
N
0.873
SAKL0F11924g
Lachancea kluyveri
SAKL0F11924g
N
0.873
PMAA_039640
Penicillium marneffei
PMAA_039640
N
0.746
Pc21g14530
Penicillium chrysogenum
Pc21g14530
N
0.761
Kwal_14810
Kluyveromyces waltii
Kwal_14810
N
0.859
KLTH0B04950g
Kluyveromyces thermotolerans
KLTH0B04950g
N
0.831
KLLA0E19845g
Kluyveromyces lactis
KLLA0E19845g
N
0.831
GSTUMT00005304001
Tuber melanosporum
GSTUMT00005304001
N
0.761
fgenesh1_pm.00168_#_115
Aspergillus carbonarius
fgenesh1_pm.00168_#_115
N
0.761
Cd36_26480
Candida dubliniensis
Cd36_26480
N
0.944
CAGL0I05082g
Candida glabrata
CAGL0I05082g
N
0.718
PIN4
Saccharomyces cerevisiae
YBL051C
N
0.746
NFIA_040180
Neosartorya fischeri
CADNFIAG00003684
N
0.761
ATEG_09814
Aspergillus terreus
CADATEAG00005663
N
0.761
PABG_00017
Paracoccidioides brasiliensis
PABG_00017
N
0.746
PIN4
Candida albicans
orf19.2534
N
0.944
MGYG_04073
Microsporum gypseum
MGYG_04073
N
0.761
MCYG_02010
Microsporum canis
MCYG_02010
N
0.761
LELG_00183
Lodderomyces elongisporus
LELG_00183
N
0.944
HCAG_04905
Histoplasma capsulatum
HCAG_04905
N
0.746
CTRG_00938
Candida tropicalis
CTRG_00938
N
0.944
CPSG_00675
Coccidioides posadasii
CPSG_00675
N
0.732
CPAG_02687
Candida parapsilosis
CPAG_02687
N
0.944
CLUG_00283
Candida lusitaniae
CLUG_00283
N
0.930
CIMG_06397
Coccidioides immitis
CIMG_06397
N
0.732
BDBG_02675
Blastomyces dermatitidis
BDBG_02675
N
0.746
PGUG_01669
Candida guilliermondii
PGUG_01669
N
0.930
PTRG_00597
Pyrenophora tritici repentis
PTRG_00597
N
0.732
SNOG_09039
Stagonospora nodorum
SNOG_09039
N
0.746
AO090003001325
Aspergillus oryzae
CADAORAG00001849
N
0.761
ANIA_08038
Aspergillus nidulans
CADANIAG00004059
N
0.761
An16g01800
Aspergillus niger
CADANGAG00012651
N
0.761
AFUA_5G01940
Aspergillus fumigatus
CADAFUAG00002843
N
0.761
AFLA_025070
Aspergillus flavus
CADAFLAG00001883
N
0.761
ACLA_003320
Aspergillus clavatus
CADACLAG00000413
N
0.746
UREG_04006
Uncinocarpus reesii
UREG_04006
N
0.718
TRV_07498
Trichophyton verrucosum
TRV_07498
N
0.761
TESG_06836
Trichophyton tonsurans
TESG_06836
N
0.761
TERG_04408
Trichophyton rubrum
TERG_04408
N
0.761
TEQG_06159
Trichophyton equinum
TEQG_06159
N
0.761
SS1G_02057
Sclerotinia sclerotiorum
SS1G_02057
N
0.704
ARB_00840
Arthroderma benhamiae
ARB_00840
N
0.761