TRV_06675 (Trichophyton verrucosum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 TRV_06675 T31242_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
TRV_06675 RRM 1 64
TRV_06675 RRM 92 154

Links

Other RRM family RBPs
Other Trichophyton verrucosum RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PMAA_028640 Penicillium marneffei PMAA_028640 N 0.896
estExt_Genewise1.C_23240 Thielavia terrestris estExt_Genewise1.C_23240 N 0.775
estExt_fgenesh3_pm.C_10926 Neurospora discreta estExt_fgenesh3_pm.C_10926 N 0.783
estExt_fgenesh1_pg.C_40107 Trichoderma atroviride estExt_fgenesh1_pg.C_40107 N 0.754
estExt_fgenesh1_pg.C_10265 Neurospora tetrasperma estExt_fgenesh1_pg.C_10265 N 0.783
e_gw1.5.1166.1 Nectria haematococca e_gw1.5.1166.1 N 0.754
NCU12158 Neurospora crassa NCU12158 N 0.783
NFIA_082870 Neosartorya fischeri CADNFIAG00006872 N 0.864
ATEG_06805 Aspergillus terreus CADATEAG00006229 N 0.848
AO090001000725 Aspergillus oryzae CADAORAG00000662 N 0.855
estExt_Genewise1Plus.C_230018 Trichoderma virens estExt_Genewise1Plus.C_230018 N 0.754
estExt_Genewise1Plus.C_240153 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_240153 N 0.761
estExt_Genewise1Plus.C_500038 Mycosphaerella fijiensis estExt_Genewise1Plus.C_500038 N 0.776
Pc22g08010 Penicillium chrysogenum Pc22g08010 N 0.812
Pa_2_12560 Podospora anserina Pa_2_12560 N 0.775
GSTUMT00005496001 Tuber melanosporum GSTUMT00005496001 N 0.763
fgenesh1_pg.00082_#_116 Aspergillus carbonarius fgenesh1_pg.00082_#_116 N 0.818
estExt_Genewise1Plus.C_70091 Cryphonectria parasitica estExt_Genewise1Plus.C_70091 N 0.761
AB01113.1 Alternaria brassicicola AB01113.1 N 0.766
gw1.6.1353.1 Mycosphaerella graminicola gw1.6.1353.1 N 0.805
gw1.3.2310.1 Myceliophthora thermophila gw1.3.2310.1 N 0.775
estExt_GeneWisePlus.C_210250 Trichoderma reesei estExt_GeneWisePlus.C_210250 N 0.761
ANIA_10941 Aspergillus nidulans CADANIAG00000536 N 0.862
An02g14690 Aspergillus niger CADANGAG00002994 N 0.826
AFUA_2G06090 Aspergillus fumigatus CADAFUAG00003703 N 0.856
GLRG_03331 Colletotrichum graminicola GLRG_03331 N 0.768
FVEG_02942 Fusarium verticillioides FVEG_02942 N 0.754
FOXG_05191 Fusarium oxysporum FOXG_05191 N 0.754
FGSG_13728 Fusarium graminearum FGSG_13728 N 0.746
CPSG_02224 Coccidioides posadasii CPSG_02224 N 0.848
CIMG_00990 Coccidioides immitis CIMG_00990 N 0.848
CHGG_07099 Chaetomium globosum CHGG_07099 N 0.775
BDBG_05401 Blastomyces dermatitidis BDBG_05401 N 0.870
BC1G_12993 Botrytis cinerea BC1G_12993 N 0.790
HCAG_03640 Histoplasma capsulatum HCAG_03640 N 0.877
MCYG_04652 Microsporum canis MCYG_04652 N 0.962
MGG_06881 Magnaporthe oryzae MGG_06881 N 0.783
AFLA_130230 Aspergillus flavus CADAFLAG00010081 N 0.855
ACLA_068230 Aspergillus clavatus CADACLAG00007015 N 0.871
VDBG_00519 Verticillium albo atrum VDBG_00519 N 0.739
UREG_00938 Uncinocarpus reesii UREG_00938 N 0.848
TESG_02793 Trichophyton tonsurans TESG_02793 N 0.906
TERG_03265 Trichophyton rubrum TERG_03265 N 0.962
TEQG_02438 Trichophyton equinum TEQG_02438 N 0.955
SS1G_05220 Sclerotinia sclerotiorum SS1G_05220 N 0.812
MGYG_08958 Microsporum gypseum MGYG_08958 N 0.840
ARB_05069 Arthroderma benhamiae ARB_05069 N 0.962