CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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A6QP53_BOVIN
(
Bos taurus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSBTAG00000016980
T34889_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000022582
RRM
242
312
LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKMDNVLIDDRRIH
Links
Other
RRM
family RBPs
Other
Bos taurus
RBPs
186 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FUBP3
Canis familiaris
ENSCAFG00000019942
N
0.000
LOC100399862
Callithrix jacchus
ENSCJAG00000020542
N
0.000
FUBP3
Felis catus
ENSFCAG00000005113
N
0.000
FUBP3
Loxodonta africana
ENSLAFG00000011611
N
0.000
FUBP3
Microcebus murinus
ENSMICG00000015452
N
0.000
FUBP3
Otolemur garnettii
ENSOGAG00000007555
N
0.000
FUBP3
Pteropus vampyrus
ENSPVAG00000001510
N
0.000
Ame_R003042
Ailuropoda melanoleuca
Ame_R003042
N
0.000