HNRNPCL1 (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSG00000179172 T37324_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPCL1
M158_0.6		 Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00167 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPC
M025_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00025 		0.906
RALY
M150_0.6 		Homo sapiens UUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00159 		0.734
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M158_0.6 RRM 18 81

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000365370 RRM 18 81

Links

Other RRM family RBPs
Other Homo sapiens RBPs

128 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A7MB38_BOVIN Bos taurus ENSBTAG00000013309 I 0.000
SRSF4 Oryctolagus cuniculus ENSOCUG00000001837 I 0.000
SRSF4 Ochotona princeps ENSOPRG00000010098 I 0.000
SRSF4 Oryzias latipes ENSORLG00000009430 I 0.000
SRSF4 Procavia capensis ENSPCAG00000009879 I 0.000
ENSPPYG00000001629 Pongo pygmaeus ENSPPYG00000001629 I 0.000
SRSF4 Pan troglodytes ENSPTRG00000000445 I 0.000
Sfrs4 Rattus norvegicus ENSRNOG00000010007 I 0.000
SRSF4 Sus scrofa ENSSSCG00000003588 I 0.000
SRSF4 Tetraodon nigroviridis ENSTNIG00000000115 I 0.000
SRSF4 Tetraodon nigroviridis ENSTNIG00000005573 I 0.000
SRSF4 Takifugu rubripes ENSTRUG00000011891 I 0.000
SRSF4 Tarsius syrichta ENSTSYG00000007903 I 0.000
SRSF4 Tursiops truncatus ENSTTRG00000002572 I 0.000
Srsf4 Mus musculus ENSMUSG00000028911 I 0.000
SRSF4 Monodelphis domestica ENSMODG00000011052 I 0.000
SRSF4 Macaca mulatta ENSMMUG00000007110 I 0.000
LOC100402973 Callithrix jacchus ENSCJAG00000009971 I 0.000
SRSF4 Cavia porcellus ENSCPOG00000007263 I 0.000
SRSF4 Dasypus novemcinctus ENSDNOG00000000968 I 0.000
Srsf4 Dipodomys ordii ENSDORG00000002459 I 0.000
SRSF4 Erinaceus europaeus ENSEEUG00000008479 I 0.000
SRSF4 Homo sapiens ENSG00000116350 I 0.000
SRSF4 Gasterosteus aculeatus ENSGACG00000002389 I 0.000
SRSF4 Loxodonta africana ENSLAFG00000002575 I 0.000
SRSF4 Meleagris gallopavo ENSMGAG00000002400 I 0.000
SRSF4 Myotis lucifugus ENSMLUG00000014770 I 0.000
Ame_R018370 Ailuropoda melanoleuca Ame_R018370 I 0.000
SRSF4 Gorilla gorilla ENSGGOG00000002444 N 0.000
ENSCJAG00000031736 Callithrix jacchus ENSCJAG00000031736 N 0.000
ENSCJAG00000010895 Callithrix jacchus ENSCJAG00000010895 N 0.000