CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF1
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000016631
T38784_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000015162
RRM
18
88
MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGM
ENSMLUP00000015162
RRM
110
177
LFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEXX
ENSMLUP00000015162
RRM
412
465
DQLLQMFMPENVSKLFIDQNLSKCXXFVSYDNPVSAQAAIQSMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
79 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100391960
Callithrix jacchus
ENSCJAG00000020663
I
0.765
CELF2
Gorilla gorilla
ENSGGOG00000009330
I
0.765
Q2KI16_BOVIN
Bos taurus
ENSBTAG00000008937
I
0.751
CUGBP1
Taeniopygia guttata
ENSTGUG00000010377
N
0.821
CUGBP2-1
Taeniopygia guttata
ENSTGUG00000002136
N
0.765
CELF2
Tetraodon nigroviridis
ENSTNIG00000007201
N
0.751
CELF2
Tupaia belangeri
ENSTBEG00000007939
N
0.765
CELF1
Tupaia belangeri
ENSTBEG00000005140
N
0.703
CELF1
Sorex araneus
ENSSARG00000003207
N
0.717
Cugbp2
Rattus norvegicus
ENSRNOG00000023661
N
0.776
Cugbp1
Rattus norvegicus
ENSRNOG00000010379
N
0.835
CELF1
Pan troglodytes
ENSPTRG00000003568
N
0.717
CELF1
Ochotona princeps
ENSOPRG00000003239
N
0.830
CELF2
Ochotona princeps
ENSOPRG00000011502
N
0.765
CELF2
Oryzias latipes
ENSORLG00000003894
N
0.706
CELF2
Oryzias latipes
ENSORLG00000017111
N
0.714
CELF1
Procavia capensis
ENSPCAG00000002631
N
0.807
ENSPPYG00000002083
Pongo pygmaeus
ENSPPYG00000002083
N
0.765
ENSPPYG00000003302
Pongo pygmaeus
ENSPPYG00000003302
N
0.840
CELF2
Pan troglodytes
ENSPTRG00000002284
N
0.765
CELF2
Tetraodon nigroviridis
ENSTNIG00000016009
N
0.706
CELF1
Takifugu rubripes
ENSTRUG00000000617
N
0.767
CELF1
Takifugu rubripes
ENSTRUG00000001711
N
0.767
Q6PF35
Xenopus laevis
Q6PF35
N
0.778
O57406
Xenopus laevis
O57406
N
0.788
ACH69783
Xenopus laevis
ACH69783
N
0.736
AAI08575
Xenopus laevis
AAI08575
N
0.788
AAH70706
Xenopus laevis
AAH70706
N
0.778
AAH57743
Xenopus laevis
AAH57743
N
0.778
AAH45035
Xenopus laevis
AAH45035
N
0.761
AAC41243
Xenopus laevis
AAC41243
N
0.788
AAB09041
Xenopus laevis
AAB09041
N
0.761
Ame_R017712
Ailuropoda melanoleuca
Ame_R017712
N
0.765
Ame_R009875
Ailuropoda melanoleuca
Ame_R009875
N
0.844
celf2
Xenopus tropicalis
ENSXETG00000021992
N
0.761
celf1
Xenopus tropicalis
ENSXETG00000009044
N
0.788
CELF1
Vicugna pacos
ENSVPAG00000000336
N
0.844
CELF1
Tursiops truncatus
ENSTTRG00000014157
N
0.844
CELF2
Takifugu rubripes
ENSTRUG00000016905
N
0.706
CELF2
Takifugu rubripes
ENSTRUG00000010147
N
0.751
Q7ZXE2
Xenopus laevis
Q7ZXE2
N
0.761
CELF2
Oryctolagus cuniculus
ENSOCUG00000004961
N
0.765
CELF1
Erinaceus europaeus
ENSEEUG00000009782
N
0.717
CELF2
Erinaceus europaeus
ENSEEUG00000005658
N
0.765
CELF1
Equus caballus
ENSECAG00000007741
N
0.844
CELF2
Equus caballus
ENSECAG00000006649
N
0.765
Celf1
Dipodomys ordii
ENSDORG00000013721
N
0.849
CELF1
Dasypus novemcinctus
ENSDNOG00000009523
N
0.711
celf1
Danio rerio
ENSDARG00000005315
N
0.759
celf2
Danio rerio
ENSDARG00000002131
N
0.746
CELF2
Cavia porcellus
ENSCPOG00000012567
N
0.765
CELF1
Cavia porcellus
ENSCPOG00000007871
N
0.844
CELF1
Anolis carolinensis
ENSACAG00000002114
N
0.830
LOC100392717
Callithrix jacchus
ENSCJAG00000020133
N
0.844
CELF1
Choloepus hoffmanni
ENSCHOG00000004196
N
0.720
CELF2
Choloepus hoffmanni
ENSCHOG00000002945
N
0.720
CELF1
Canis familiaris
ENSCAFG00000008452
N
0.844
CELF2
Canis familiaris
ENSCAFG00000004973
N
0.765
A7MB95_BOVIN
Bos taurus
ENSBTAG00000002520
N
0.844
CELF2
Echinops telfairi
ENSETEG00000008414
N
0.774
CELF2
Homo sapiens
ENSG00000048740
N
0.765
CELF1
Oryctolagus cuniculus
ENSOCUG00000001311
N
0.844
CELF1
Ornithorhynchus anatinus
ENSOANG00000007896
N
0.830
Celf1
Mus musculus
ENSMUSG00000005506
N
0.835
Celf2
Mus musculus
ENSMUSG00000002107
N
0.776
CELF1
Monodelphis domestica
ENSMODG00000019913
N
0.830
CELF1
Macaca mulatta
ENSMMUG00000011657
N
0.844
CELF2
Macaca mulatta
ENSMMUG00000011468
N
0.765
CELF2
Microcebus murinus
ENSMICG00000007867
N
0.765
CELF1
Microcebus murinus
ENSMICG00000007157
N
0.792
CELF1
Meleagris gallopavo
ENSMGAG00000010629
N
0.821
CELF1
Macropus eugenii
ENSMEUG00000007763
N
0.830
CELF2
Loxodonta africana
ENSLAFG00000013612
N
0.765
CELF1
Loxodonta africana
ENSLAFG00000003484
N
0.844
CELF1_CHICK
Gallus gallus
ENSGALG00000008097
N
0.821
CELF2_CHICK
Gallus gallus
ENSGALG00000006713
N
0.765
CELF2
Gasterosteus aculeatus
ENSGACG00000004426
N
0.706
CELF1
Homo sapiens
ENSG00000149187
N
0.844
CELF2
Anolis carolinensis
ENSACAG00000007661
N
0.765