XR_023586.1 (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000004121 T40656_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMX
M344_0.6 		Homo sapiens CCM SELEX
Cook et al.(2011)
922_19282290 		0.958
RBMY1A1
M247_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1053_17318228 		0.761
RBMY1A1
M246_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1052_17318228 		0.761
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000059346 RRM 10 80

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

83 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBMX Homo sapiens ENSG00000147274 D 0.958
RBMY1A1 Homo sapiens ENSG00000234414 D 0.746
Rbmx Mus musculus ENSMUSG00000031134 I 0.958
ENSPPYG00000020771 Pongo pygmaeus ENSPPYG00000020771 I 0.958
HNRPG_PANTR Pan troglodytes ENSPTRG00000000933 I 0.930
RBMXL2 Pan troglodytes ENSPTRG00000003312 I 0.901
LOC750990 Pan troglodytes ENSPTRG00000028802 I 0.761
ENSPTRG00000028821 Pan troglodytes ENSPTRG00000028821 I 0.746
Q52NW1_PANTR Pan troglodytes ENSPTRG00000028822 I 0.761
ENSPPYG00000019152 Pongo pygmaeus ENSPPYG00000019152 I 0.901
ENSPPYG00000001177 Pongo pygmaeus ENSPPYG00000001177 I 0.930
RBMXL3 Oryzias latipes ENSORLG00000001692 I 0.873
Rbmxrt Mus musculus ENSMUSG00000037070 I 0.944
ENSMUSG00000049235 Mus musculus ENSMUSG00000049235 I 0.944
Rbmxl2 Mus musculus ENSMUSG00000073894 I 0.831
ENSOANG00000011670 Ornithorhynchus anatinus ENSOANG00000011670 I 0.958
RBMXL1 Oryctolagus cuniculus ENSOCUG00000007220 I 0.958
ENSOCUG00000021095 Oryctolagus cuniculus ENSOCUG00000021095 I 0.873
RBMX Oryctolagus cuniculus ENSOCUG00000024093 I 0.958
ENSOCUG00000028230 Oryctolagus cuniculus ENSOCUG00000028230 I 0.958
XR_020119.1 Pan troglodytes ENSPTRG00000028826 I 0.761
XR_019934.1 Pan troglodytes ENSPTRG00000032589 I 0.761
ENSPTRG00000032590 Pan troglodytes ENSPTRG00000032590 I 0.761
RBMXL3 Takifugu rubripes ENSTRUG00000006031 I 0.859
RBMX Tarsius syrichta ENSTSYG00000009555 I 0.944
ENSTTRG00000003238 Tursiops truncatus ENSTTRG00000003238 I 0.817
RBMXL1 Tursiops truncatus ENSTTRG00000007322 I 0.958
ENSVPAG00000002726 Vicugna pacos ENSVPAG00000002726 I 0.873
RBMXL1 Vicugna pacos ENSVPAG00000005826 I 0.958
Ame_R008043 Ailuropoda melanoleuca Ame_R008043 I 0.958
Ame_R020019 Ailuropoda melanoleuca Ame_R020019 I 0.789
RBMXL3 Tetraodon nigroviridis ENSTNIG00000016844 I 0.845
RBMX Taeniopygia guttata ENSTGUG00000002135 I 0.958
XR_020159.1 Pan troglodytes ENSPTRG00000032591 I 0.761
RBMX Pan troglodytes ENSPTRG00000034071 I 0.901
Rbmx Rattus norvegicus ENSRNOG00000000866 I 0.958
Rbmxrtl Rattus norvegicus ENSRNOG00000012138 I 0.930
D3ZT57_RAT Rattus norvegicus ENSRNOG00000021946 I 0.803
D4AE41_RAT Rattus norvegicus ENSRNOG00000028858 I 0.930
RBMXL1 Sus scrofa ENSSSCG00000012703 I 0.958
ENSTBEG00000001154 Tupaia belangeri ENSTBEG00000001154 I 0.873
AAH70649 Xenopus laevis AAH70649 I 0.887
XM_001367159.1 Monodelphis domestica ENSMODG00000014054 I 0.901
RBMXL1 Myotis lucifugus ENSMLUG00000013209 I 0.958
RBMX Cavia porcellus ENSCPOG00000012164 I 0.958
rbmx Danio rerio ENSDARG00000014244 I 0.803
ENSDNOG00000009042 Dasypus novemcinctus ENSDNOG00000009042 I 0.859
RBMXL1 Dasypus novemcinctus ENSDNOG00000017199 I 0.958
Rbmxl2 Dipodomys ordii ENSDORG00000010267 I 0.845
LOC100054583 Equus caballus ENSECAG00000021380 I 0.958
RBMX Felis catus ENSFCAG00000004779 I 0.845
RBMY1F Homo sapiens ENSG00000169800 I 0.732
RBMXL1 Callithrix jacchus ENSCJAG00000032899 I 0.958
LOC100415631 Callithrix jacchus ENSCJAG00000022240 I 0.873
HNRPG_BOVIN Bos taurus ENSBTAG00000011807 I 0.845
D3JUI8_BOVIN Bos taurus ENSBTAG00000013308 I 0.958
HNRPG_BOVIN Bos taurus ENSBTAG00000036140 I 0.845
RBMXL1 Canis familiaris ENSCAFG00000018962 I 0.944
LOC100406653 Callithrix jacchus ENSCJAG00000003626 I 0.958
RBMXL3 Callithrix jacchus ENSCJAG00000006948 I 0.718
ENSCJAG00000013619 Callithrix jacchus ENSCJAG00000013619 I 0.873
ENSCJAG00000016247 Callithrix jacchus ENSCJAG00000016247 I 0.845
RBMXL2 Homo sapiens ENSG00000170748 I 0.901
RBMXL3 Homo sapiens ENSG00000175718 I 0.775
ENSLAFG00000005568 Loxodonta africana ENSLAFG00000005568 I 0.958
ENSLAFG00000014037 Loxodonta africana ENSLAFG00000014037 I 0.859
ENSLAFG00000020807 Loxodonta africana ENSLAFG00000020807 I 0.845
ENSLAFG00000022169 Loxodonta africana ENSLAFG00000022169 I 0.915
O97560_MACEU Macropus eugenii ENSMEUG00000013834 I 0.901
ENSMEUG00000015892 Macropus eugenii ENSMEUG00000015892 I 0.901
RBMX Meleagris gallopavo ENSMGAG00000003594 I 0.958
RBMXL1 Microcebus murinus ENSMICG00000006856 I 0.958
RBMXL1 Gorilla gorilla ENSGGOG00000027619 I 0.958
RBMXL3 Gorilla gorilla ENSGGOG00000027260 I 0.761
RBMXL1 Homo sapiens ENSG00000213516 I 0.930
RBMY1J Homo sapiens ENSG00000226941 I 0.732
RBMY1E Homo sapiens ENSG00000242389 I 0.746
RBMY1B Homo sapiens ENSG00000242875 I 0.746
RBMY1D Homo sapiens ENSG00000244395 I 0.746
RBMXL3 Gasterosteus aculeatus ENSGACG00000017237 I 0.873
Q5ZKQ9_CHICK Gallus gallus ENSGALG00000006457 I 0.958
Q2VIN1_9PRIM Gorilla gorilla ENSGGOG00000012016 I 0.930
ENSACAG00000009551 Anolis carolinensis ENSACAG00000009551 I 0.958