RBMX (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000034071 T40819_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMX
M344_0.6 		Homo sapiens CCM SELEX
Cook et al.(2011)
922_19282290 		0.944
RBMY1A1
M247_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1053_17318228 		0.746
RBMY1A1
M246_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1052_17318228 		0.746
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000048383 RRM 10 79

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

83 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBMX Homo sapiens ENSG00000147274 D 0.944
RBMY1A1 Homo sapiens ENSG00000234414 D 0.732
Rbmx Mus musculus ENSMUSG00000031134 I 0.944
ENSPPYG00000020771 Pongo pygmaeus ENSPPYG00000020771 I 0.944
HNRPG_PANTR Pan troglodytes ENSPTRG00000000933 I 0.915
RBMXL2 Pan troglodytes ENSPTRG00000003312 I 0.887
XR_023586.1 Pan troglodytes ENSPTRG00000004121 I 0.901
LOC750990 Pan troglodytes ENSPTRG00000028802 I 0.746
ENSPTRG00000028821 Pan troglodytes ENSPTRG00000028821 I 0.732
ENSPPYG00000019152 Pongo pygmaeus ENSPPYG00000019152 I 0.915
ENSPPYG00000001177 Pongo pygmaeus ENSPPYG00000001177 I 0.915
RBMXL3 Oryzias latipes ENSORLG00000001692 I 0.845
Rbmxrt Mus musculus ENSMUSG00000037070 I 0.930
ENSMUSG00000049235 Mus musculus ENSMUSG00000049235 I 0.930
Rbmxl2 Mus musculus ENSMUSG00000073894 I 0.817
ENSOANG00000011670 Ornithorhynchus anatinus ENSOANG00000011670 I 0.944
RBMXL1 Oryctolagus cuniculus ENSOCUG00000007220 I 0.944
ENSOCUG00000021095 Oryctolagus cuniculus ENSOCUG00000021095 I 0.859
RBMX Oryctolagus cuniculus ENSOCUG00000024093 I 0.944
ENSOCUG00000028230 Oryctolagus cuniculus ENSOCUG00000028230 I 0.944
Q52NW1_PANTR Pan troglodytes ENSPTRG00000028822 I 0.746
XR_020119.1 Pan troglodytes ENSPTRG00000028826 I 0.746
XR_019934.1 Pan troglodytes ENSPTRG00000032589 I 0.746
RBMXL3 Takifugu rubripes ENSTRUG00000006031 I 0.831
RBMX Tarsius syrichta ENSTSYG00000009555 I 0.930
ENSTTRG00000003238 Tursiops truncatus ENSTTRG00000003238 I 0.803
RBMXL1 Tursiops truncatus ENSTTRG00000007322 I 0.944
ENSVPAG00000002726 Vicugna pacos ENSVPAG00000002726 I 0.845
RBMXL1 Vicugna pacos ENSVPAG00000005826 I 0.944
Ame_R008043 Ailuropoda melanoleuca Ame_R008043 I 0.944
Ame_R020019 Ailuropoda melanoleuca Ame_R020019 I 0.775
RBMXL3 Tetraodon nigroviridis ENSTNIG00000016844 I 0.817
RBMX Taeniopygia guttata ENSTGUG00000002135 I 0.944
ENSPTRG00000032590 Pan troglodytes ENSPTRG00000032590 I 0.746
XR_020159.1 Pan troglodytes ENSPTRG00000032591 I 0.746
Rbmx Rattus norvegicus ENSRNOG00000000866 I 0.944
Rbmxrtl Rattus norvegicus ENSRNOG00000012138 I 0.915
D3ZT57_RAT Rattus norvegicus ENSRNOG00000021946 I 0.789
D4AE41_RAT Rattus norvegicus ENSRNOG00000028858 I 0.915
RBMXL1 Sus scrofa ENSSSCG00000012703 I 0.944
ENSTBEG00000001154 Tupaia belangeri ENSTBEG00000001154 I 0.845
AAH70649 Xenopus laevis AAH70649 I 0.859
XM_001367159.1 Monodelphis domestica ENSMODG00000014054 I 0.887
RBMXL1 Myotis lucifugus ENSMLUG00000013209 I 0.944
RBMX Cavia porcellus ENSCPOG00000012164 I 0.944
rbmx Danio rerio ENSDARG00000014244 I 0.775
ENSDNOG00000009042 Dasypus novemcinctus ENSDNOG00000009042 I 0.873
RBMXL1 Dasypus novemcinctus ENSDNOG00000017199 I 0.944
Rbmxl2 Dipodomys ordii ENSDORG00000010267 I 0.831
LOC100054583 Equus caballus ENSECAG00000021380 I 0.944
RBMX Felis catus ENSFCAG00000004779 I 0.817
RBMY1F Homo sapiens ENSG00000169800 I 0.718
RBMXL1 Callithrix jacchus ENSCJAG00000032899 I 0.944
LOC100415631 Callithrix jacchus ENSCJAG00000022240 I 0.859
HNRPG_BOVIN Bos taurus ENSBTAG00000011807 I 0.831
D3JUI8_BOVIN Bos taurus ENSBTAG00000013308 I 0.944
HNRPG_BOVIN Bos taurus ENSBTAG00000036140 I 0.831
RBMXL1 Canis familiaris ENSCAFG00000018962 I 0.931
LOC100406653 Callithrix jacchus ENSCJAG00000003626 I 0.944
RBMXL3 Callithrix jacchus ENSCJAG00000006948 I 0.718
ENSCJAG00000013619 Callithrix jacchus ENSCJAG00000013619 I 0.859
ENSCJAG00000016247 Callithrix jacchus ENSCJAG00000016247 I 0.859
RBMXL2 Homo sapiens ENSG00000170748 I 0.887
RBMXL3 Homo sapiens ENSG00000175718 I 0.775
ENSLAFG00000005568 Loxodonta africana ENSLAFG00000005568 I 0.944
ENSLAFG00000014037 Loxodonta africana ENSLAFG00000014037 I 0.817
ENSLAFG00000020807 Loxodonta africana ENSLAFG00000020807 I 0.831
ENSLAFG00000022169 Loxodonta africana ENSLAFG00000022169 I 0.930
O97560_MACEU Macropus eugenii ENSMEUG00000013834 I 0.887
ENSMEUG00000015892 Macropus eugenii ENSMEUG00000015892 I 0.887
RBMX Meleagris gallopavo ENSMGAG00000003594 I 0.944
RBMXL1 Microcebus murinus ENSMICG00000006856 I 0.944
RBMXL1 Gorilla gorilla ENSGGOG00000027619 I 0.944
RBMXL3 Gorilla gorilla ENSGGOG00000027260 I 0.775
RBMXL1 Homo sapiens ENSG00000213516 I 0.915
RBMY1J Homo sapiens ENSG00000226941 I 0.718
RBMY1E Homo sapiens ENSG00000242389 I 0.732
RBMY1B Homo sapiens ENSG00000242875 I 0.732
RBMY1D Homo sapiens ENSG00000244395 I 0.732
RBMXL3 Gasterosteus aculeatus ENSGACG00000017237 I 0.845
Q5ZKQ9_CHICK Gallus gallus ENSGALG00000006457 I 0.944
Q2VIN1_9PRIM Gorilla gorilla ENSGGOG00000012016 I 0.915
ENSACAG00000009551 Anolis carolinensis ENSACAG00000009551 I 0.944