GSVIVG00007865001 (Vitis vinifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSVIVG00007865001 T44623_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00007865001 RRM 42 112

Links

Other RRM family RBPs
Other Vitis vinifera RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK15111.1 Cannabis sativa PK15111.1 N 0.859
GRMZM2G150521 Zea mays GRMZM2G150521 N 0.732
GRMZM2G009448 Zea mays GRMZM2G009448 N 0.704
mgf016144m Mimulus guttatus mgf016144m N 0.845
mgf014059m Mimulus guttatus mgf014059m N 0.845
mgf012875m Mimulus guttatus mgf012875m N 0.845
mgf007732m Mimulus guttatus mgf007732m N 0.901
Glyma18g50150.1 Glycine max Glyma18g50150.1 N 0.775
Glyma17g08630.1 Glycine max Glyma17g08630.1 N 0.817
Medtr3g036670 Medicago truncatula Medtr3g036670 N 0.704
Medtr3g105170 Medicago truncatula Medtr3g105170 N 0.718
PDK_20s1742611g001 Phoenix dactylifera PDK_20s1742611g001 N 0.732
PDK_20s1615461g006 Phoenix dactylifera PDK_20s1615461g006 N 0.704
PDK_20s1328241g004 Phoenix dactylifera PDK_20s1328241g004 N 0.817
MDP0000635271 Malus x domestica MDP0000635271 N 0.859
MDP0000302917 Malus x domestica MDP0000302917 N 0.803
MDP0000255642 Malus x domestica MDP0000255642 N 0.803
LjT12A09.50.nd Lotus japonicus LjT12A09.50.nd N 0.746
chr1.CM0410.300.nd Lotus japonicus chr1.CM0410.300.nd N 0.775
Glyma08g26900.1 Glycine max Glyma08g26900.1 N 0.761
Glyma05g00400.1 Glycine max Glyma05g00400.1 N 0.817
A9PGV5_POPTR Populus trichocarpa POPTR_0001s32720 N 0.718
LOC_Os12g31800 Oryza sativa LOC_Os12g31800 N 0.704
LOC_Os10g17454 Oryza sativa LOC_Os10g17454 N 0.746
XM_002887486.1 Arabidopsis lyrata fgenesh2_kg.2__1690__AT1G74230.1 N 0.761
XM_002864670.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002097 N 0.817
BGIOSIBCE036678 Oryza indica BGIOSIBCE036678 N 0.704
GR-RBP3 Arabidopsis thaliana AT5G61030-TAIR-G N 0.803
GR-RBP5 Arabidopsis thaliana AT1G74230-TAIR-G N 0.761
B9I2R7_POPTR Populus trichocarpa POPTR_0012s05870 N 0.831
A9PIG6_POPTR Populus trichocarpa POPTR_0015s06810 N 0.789
Cucsa.198260 Cucumis sativus Cucsa.198260 N 0.901
Cucsa.113230 Cucumis sativus Cucsa.113230 N 0.789
cassava43399.valid.m1 Manihot esculenta cassava43399.valid.m1 N 0.887
cassava29352.valid.m1 Manihot esculenta cassava29352.valid.m1 N 0.915
cassava29351.valid.m1 Manihot esculenta cassava29351.valid.m1 N 0.915
30138.m003973 Ricinus communis 30138.m003973 N 0.887
SB08G015580 Sorghum bicolor Sb08g015580 N 0.746
B9P731_POPTR Populus trichocarpa POPTR_0323s00210 N 0.718
ppa010113m Prunus persica ppa010113m N 0.859