30138.m003973 (Ricinus communis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 30138.m003973 T48763_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
30138.m003973 RRM 42 112

Links

Other RRM family RBPs
Other Ricinus communis RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK15111.1 Cannabis sativa PK15111.1 N 0.817
Glyma17g08630.1 Glycine max Glyma17g08630.1 N 0.775
Glyma18g50150.1 Glycine max Glyma18g50150.1 N 0.746
mgf007732m Mimulus guttatus mgf007732m N 0.803
mgf012875m Mimulus guttatus mgf012875m N 0.789
mgf014059m Mimulus guttatus mgf014059m N 0.789
mgf016144m Mimulus guttatus mgf016144m N 0.789
GRMZM2G150521 Zea mays GRMZM2G150521 N 0.775
Medtr3g036670 Medicago truncatula Medtr3g036670 N 0.718
chr1.CM0410.300.nd Lotus japonicus chr1.CM0410.300.nd N 0.789
MDP0000255642 Malus x domestica MDP0000255642 N 0.761
MDP0000302917 Malus x domestica MDP0000302917 N 0.761
MDP0000635271 Malus x domestica MDP0000635271 N 0.831
PDK_20s1328241g004 Phoenix dactylifera PDK_20s1328241g004 N 0.761
PDK_20s1742611g001 Phoenix dactylifera PDK_20s1742611g001 N 0.704
Glyma08g26900.1 Glycine max Glyma08g26900.1 N 0.732
Glyma05g00400.1 Glycine max Glyma05g00400.1 N 0.775
GR-RBP5 Arabidopsis thaliana AT1G74230-TAIR-G N 0.761
GR-RBP3 Arabidopsis thaliana AT5G61030-TAIR-G N 0.732
XM_002864670.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002097 N 0.746
XM_002887486.1 Arabidopsis lyrata fgenesh2_kg.2__1690__AT1G74230.1 N 0.761
GSVIVG00007865001 Vitis vinifera GSVIVG00007865001 N 0.887
LOC_Os10g17454 Oryza sativa LOC_Os10g17454 N 0.718
B9I2R7_POPTR Populus trichocarpa POPTR_0012s05870 N 0.859
A9PIG6_POPTR Populus trichocarpa POPTR_0015s06810 N 0.803
SB08G015580 Sorghum bicolor Sb08g015580 N 0.732
cassava29351.valid.m1 Manihot esculenta cassava29351.valid.m1 N 0.901
cassava29352.valid.m1 Manihot esculenta cassava29352.valid.m1 N 0.901
cassava43399.valid.m1 Manihot esculenta cassava43399.valid.m1 N 0.887
Cucsa.113230 Cucumis sativus Cucsa.113230 N 0.775
Cucsa.198260 Cucumis sativus Cucsa.198260 N 0.915
ppa010113m Prunus persica ppa010113m N 0.831