fgeneshTA2_pg.C_scaffold_8000290 (Trichoplax adhaerens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgeneshTA2_pg.C_scaffold_8000290 T52539_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgeneshTA2_pg.C_scaffold_8000290 RRM 234 304

Links

Other RRM family RBPs
Other Trichoplax adhaerens RBPs

173 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.000
amel4_ncbi_hmm16330 Apis mellifera amel4_ncbi_hmm16330 I 0.000
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.000
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.000
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.000
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.000
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.000
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.000
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.000
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.000
fgenesh1_pm.C_scaffold_76000004 Capitella teleta fgenesh1_pm.C_scaffold_76000004 I 0.000
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.000
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.000
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.000
DGIL_AUG5s5532g9t1 Acyrtosiphon pisum DGIL_AUG5s5532g9t1 I 0.000
nasonia_NCBI_hmm938274 Nasonia vitripennis nasonia_NCBI_hmm938274 I 0.000
PASA_GEN_0700132 Daphnia pulex PASA_GEN_0700132 I 0.000
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.000
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.000
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.000
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.000
LOC100050101 Equus caballus ENSECAG00000012413 I 0.000
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.000
PCBP3 Gallus gallus ENSGALG00000013155 I 0.000
PCBP3 Homo sapiens ENSG00000183570 I 0.000
AGAP004942 Anopheles gambiae AGAP004942 N 0.000
e_gw1.66.95.1 Lottia gigantea e_gw1.66.95.1 N 0.000
FBgn0262737 Drosophila melanogaster FBgn0262737 N 0.000
GE22592 Drosophila yakuba FBgn0239809 N 0.000
GK10610 Drosophila willistoni FBgn0212625 N 0.000
GJ11921 Drosophila virilis FBgn0199174 N 0.000
GI13561 Drosophila mojavensis FBgn0136316 N 0.000
GG16232 Drosophila erecta FBgn0108467 N 0.000
GA20351-RA Drosophila pseudoobscura FBgn0080346 N 0.000
GH14429 Drosophila grimshawi FBgn0121905 N 0.000