CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ZC3HF_BOVIN
(
Bos taurus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSBTAG00000021762
T02275_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000029007
CCCH ZF
100
125
PKSVVCAFFKQGQCTKGDKCKFSHDL
Links
Other
CCCH ZF
family RBPs
Other
Bos taurus
RBPs
144 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BRADI4G32380
Brachypodium distachyon
BRADI4G32380
N
0.000
GRMZM2G168163
Zea mays
GRMZM2G168163
I
0.000
GRMZM2G467907
Zea mays
GRMZM2G467907
I
0.000
LOC_Os09g28810
Oryza sativa
LOC_Os09g28810
I
0.000
PDK_20s1512141g001
Phoenix dactylifera
PDK_20s1512141g001
N
0.000
Sb02g026820
Sorghum bicolor
Sb02g026820
I
0.000