CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
ENSOCUG00000011903
(
Oryctolagus cuniculus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSOCUG00000011903
T03054_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000010230
CCCH ZF
100
125
PKSVVCAFFKQGQCTKGDKCKFSHDL
Links
Other
CCCH ZF
family RBPs
Other
Oryctolagus cuniculus
RBPs
144 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Minc00058
Meloidogyne incognita
Minc00058
N
0.000
Minc01889
Meloidogyne incognita
Minc01889
N
0.000
Minc06343
Meloidogyne incognita
Minc06343
N
0.000
Minc09197
Meloidogyne incognita
Minc09197
N
0.000
Minc13978
Meloidogyne incognita
Minc13978
N
0.000
NCBI_GNO_14600006
Daphnia pulex
NCBI_GNO_14600006
N
0.000