CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GK21573
(
Drosophila willistoni
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
FBgn0223565
T03804_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0250716
CCCH ZF
94
119
PKSVVCAFFKQGICTKGDKCKFSHDL
Links
Other
CCCH ZF
family RBPs
Other
Drosophila willistoni
RBPs
138 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
e_gw.4.464.1
Branchiostoma floridae
e_gw.4.464.1
N
0.000
fgenesh1_pg.C_scaffold_11925000001
Capitella teleta
fgenesh1_pg.C_scaffold_11925000001
N
0.000
fgenesh1_pg.C_scaffold_3158000001
Capitella teleta
fgenesh1_pg.C_scaffold_3158000001
N
0.000
fgenesh1_pg.C_scaffold_6026000001
Capitella teleta
fgenesh1_pg.C_scaffold_6026000001
N
0.000
fgenesh1_pg.C_scaffold_642000003
Capitella teleta
fgenesh1_pg.C_scaffold_642000003
N
0.000
fgenesh1_pg.C_scaffold_836000001
Capitella teleta
fgenesh1_pg.C_scaffold_836000001
N
0.000