Celf5 (Dipodomys ordii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDORG00000005915 T36457_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.773
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000005540 RRM 1 29
ENSDORP00000005540 RRM 49 115
ENSDORP00000005540 RRM 314 384

Links

Other RRM family RBPs
Other Dipodomys ordii RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACH69785 Xenopus laevis ACH69785 I 0.724
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.786
BRUNOL5 Taeniopygia guttata ENSTGUG00000000514 I 0.935
BRUNOL5 Homo sapiens ENSG00000161082 D 0.781
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.769
CELF3 Macaca mulatta ENSMMUG00000016952 I 0.720
CELF3 Microcebus murinus ENSMICG00000010644 N 0.793
CELF3 Homo sapiens ENSG00000159409 I 0.744
celf4 Danio rerio ENSDARG00000070045 I 0.835
CELF5 Echinops telfairi ENSETEG00000016221 I 0.970
CELF5 Canis familiaris ENSCAFG00000019263 I 0.971
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.714
CELF5 Tursiops truncatus ENSTTRG00000009625 I 0.976
CELF5 Sus scrofa ENSSSCG00000013476 I 0.959
CELF5 Pteropus vampyrus ENSPVAG00000014619 I 0.976
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.757
CELF5 Procavia capensis ENSPCAG00000002170 I 0.941
CELF5 Oryzias latipes ENSORLG00000004600 I 0.705
CELF5 Otolemur garnettii ENSOGAG00000014161 I 0.994
celf5 Danio rerio ENSDARG00000071375 I 0.700
CELF5 Myotis lucifugus ENSMLUG00000006471 N 0.735
CELF5 Equus caballus ENSECAG00000018055 N 0.737
CELF5 Meleagris gallopavo ENSMGAG00000001169 I 0.935
CELF5 Loxodonta africana ENSLAFG00000026387 N 0.734
CELF5 Bos taurus ENSBTAG00000021774 I 0.965
CELF6 Cavia porcellus ENSCPOG00000025842 I 0.818