CELF6 (Cavia porcellus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCPOG00000025842 T35918_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.787
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000014830 RRM 1 31
ENSCPOP00000014830 RRM 50 117
ENSCPOP00000014830 RRM 290 360

Links

Other RRM family RBPs
Other Cavia porcellus RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CELF5 Canis familiaris ENSCAFG00000019263 I 0.836
CELF5 Tursiops truncatus ENSTTRG00000009625 I 0.830
CELF5 Pteropus vampyrus ENSPVAG00000014619 I 0.830
CELF5 Sus scrofa ENSSSCG00000013476 I 0.826
BRUNOL5 Taeniopygia guttata ENSTGUG00000000514 I 0.825
CELF5 Meleagris gallopavo ENSMGAG00000001169 I 0.825
CELF5 Otolemur garnettii ENSOGAG00000014161 I 0.824
CELF5 Echinops telfairi ENSETEG00000016221 I 0.824
CELF5 Bos taurus ENSBTAG00000021774 I 0.820
CELF3 Microcebus murinus ENSMICG00000010644 N 0.819
celf4 Danio rerio ENSDARG00000070045 I 0.819
Celf5 Dipodomys ordii ENSDORG00000005915 I 0.818
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.815
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.812
CELF6 Vicugna pacos ENSVPAG00000002850 N 0.809
HEXA Macaca mulatta ENSMMUG00000010687 I 0.809
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.809
CELF6 Sus scrofa ENSSSCG00000001928 I 0.804
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.804
CELF6 Felis catus ENSFCAG00000016249 I 0.804
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.804
CELF6 Bos taurus ENSBTAG00000014092 I 0.804
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.804
BRUNOL6 Homo sapiens ENSG00000140488 D 0.804
CELF5 Procavia capensis ENSPCAG00000002170 I 0.802
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.800
Celf6 Mus musculus ENSMUSG00000032297 I 0.800
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.799
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.791
CELF3 Homo sapiens ENSG00000159409 I 0.783
CELF3 Macaca mulatta ENSMMUG00000016952 I 0.758
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.732
Celf6 Dipodomys ordii ENSDORG00000004882 I 0.700