Ame_R011948 (Ailuropoda melanoleuca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Ame_R011948 T55593_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.990
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.843
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.777
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.758
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Ame_R011948 RRM 28 97
Ame_R011948 RRM 117 185
Ame_R011948 RRM 380 450

Links

Other RRM family RBPs
Other Ailuropoda melanoleuca RBPs

94 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRUNOL5 Homo sapiens ENSG00000161082 D 0.990
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.952
ACH69785 Xenopus laevis ACH69785 I 0.924
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.914
CELF5 Oryzias latipes ENSORLG00000004600 I 0.895
celf5 Danio rerio ENSDARG00000071375 I 0.890
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.881
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.881
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.876
Celf4 Mus musculus ENSMUSG00000024268 I 0.876
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.867
CELF4 Oryzias latipes ENSORLG00000008913 I 0.867
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.857
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.857
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.852
Celf6 Mus musculus ENSMUSG00000032297 I 0.848
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.848
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.843
CELF6 Felis catus ENSFCAG00000016249 I 0.843
CELF6 Sus scrofa ENSSSCG00000001928 I 0.843
AAH72134 Xenopus laevis AAH72134 I 0.843
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.843
AAH57704 Xenopus laevis AAH57704 I 0.843
AAA81375 Xenopus laevis AAA81375 I 0.843
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.843
HEXA Macaca mulatta ENSMMUG00000010687 I 0.843
Q91579 Xenopus laevis Q91579 I 0.843
BRUNOL6 Homo sapiens ENSG00000140488 D 0.843
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.843
CELF6 Bos taurus ENSBTAG00000014092 I 0.843
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.838
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.838
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.833
AAH46942 Xenopus laevis AAH46942 I 0.833
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.830
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.829
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.829
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.824
celf3 Danio rerio ENSDARG00000034668 I 0.824
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.819
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.819
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.819
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.819
Celf3 Mus musculus ENSMUSG00000028137 I 0.819
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.819
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.819
CELF3 Canis familiaris ENSCAFG00000012794 I 0.819
CELF3 Homo sapiens ENSG00000159409 I 0.819
CELF3 Equus caballus ENSECAG00000020365 I 0.819
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.819
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.819
CELF3 Danio rerio ENSDARG00000006983 I 0.819
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.819
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.819
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.814
CELF5 Macropus eugenii ENSMEUG00000013080 I 0.810
CELF5 Canis familiaris ENSCAFG00000019263 I 0.810
CELF3 Oryzias latipes ENSORLG00000010447 I 0.807
CELF5 Pteropus vampyrus ENSPVAG00000014619 I 0.805
CELF5 Tursiops truncatus ENSTTRG00000009625 I 0.805
CELF5 Sus scrofa ENSSSCG00000013476 I 0.801
Celf6 Dipodomys ordii ENSDORG00000004882 I 0.800
CELF3 Sus scrofa ENSSSCG00000006618 I 0.800
CELF5 Bos taurus ENSBTAG00000021774 I 0.796
CELF3 Procavia capensis ENSPCAG00000001623 I 0.795
CELF5 Otolemur garnettii ENSOGAG00000014161 I 0.790
Bm1_27610 Brugia malayi Bm1_27610 I 0.790
ENSPPYG00000009118 Pongo pygmaeus ENSPPYG00000009118 I 0.787
Celf5 Dipodomys ordii ENSDORG00000005915 I 0.786
CELF3 Ochotona princeps ENSOPRG00000011130 I 0.786
ACH69784 Xenopus laevis ACH69784 I 0.782
CELF4 Pteropus vampyrus ENSPVAG00000009204 I 0.782
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 0.782
CELF4 Gorilla gorilla ENSGGOG00000013920 I 0.782
BRUNOL4 Homo sapiens ENSG00000101489 D 0.782
BRUNOL5 Taeniopygia guttata ENSTGUG00000000514 I 0.781
CELF5 Meleagris gallopavo ENSMGAG00000001169 I 0.781
CELF4 Tursiops truncatus ENSTTRG00000016826 I 0.777
CELF5 Procavia capensis ENSPCAG00000002170 I 0.777
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.773
CELF5 Echinops telfairi ENSETEG00000016221 I 0.771
CELF4 Gasterosteus aculeatus ENSGACG00000008752 I 0.768
CBG15358 Caenorhabditis briggsae CBG15358 I 0.763
CRE09771 Caenorhabditis remanei CRE09771 I 0.763
unc-75 Caenorhabditis elegans C17D12.2 D 0.758
CELF6 Oryctolagus cuniculus ENSOCUG00000021663 I 0.748
XP_781047.2 Strongylocentrotus purpuratus XP_781047.2 I 0.731
XP_001192920.1 Strongylocentrotus purpuratus XP_001192920.1 I 0.731
CELF3 Macaca mulatta ENSMMUG00000016952 I 0.719
CELF4 Ochotona princeps ENSOPRG00000014415 I 0.711
CELF3 Oryzias latipes ENSORLG00000002630 I 0.711
ENSCING00000001999 Ciona intestinalis ENSCING00000001999 I 0.706
ENSCSAVG00000007538 Ciona savignyi ENSCSAVG00000007538 I 0.706
celf4 Danio rerio ENSDARG00000070045 I 0.700