RALYL (Spermophilus tridecemlineatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSTOG00000012583 T41645_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPC
M025_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00025 		0.781
RALY
M150_0.6 		Homo sapiens UUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00159 		0.734
HNRNPCL1
M158_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00167 		0.719
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000011274 RRM 23 86

Links

Other RRM family RBPs
Other Spermophilus tridecemlineatus RBPs

127 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AKAP17A Cavia porcellus ENSCPOG00000027526 N 0.000
AKAP17A Sus scrofa ENSSSCG00000012627 N 0.000
Akap17b Mus musculus ENSMUSG00000059708 N 0.000
Akap17b Rattus norvegicus ENSRNOG00000009746 N 0.000
Ame_R003931 Ailuropoda melanoleuca Ame_R003931 N 0.000
ENSCAFG00000018374 Canis familiaris ENSCAFG00000018374 N 0.000
ENSCJAG00000005163 Callithrix jacchus ENSCJAG00000005163 N 0.000
ENSECAG00000011820 Equus caballus ENSECAG00000011820 N 0.000
ENSLAFG00000020744 Loxodonta africana ENSLAFG00000020744 N 0.000
ENSOANG00000011324 Ornithorhynchus anatinus ENSOANG00000011324 N 0.000
Q0VCT7_BOVIN Bos taurus ENSBTAG00000019553 N 0.000