Skud_Contig1725.4 (Saccharomyces kudriavzevii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Skud_Contig1725.4 T54930_0.6 SGD (2003-Oct-3)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Skud_Contig1725.4 RRM 88 158

Links

Other RRM family RBPs
Other Saccharomyces kudriavzevii RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
1078_YHR132C Saccharomyces bayanus 1078_YHR132C N 1.000
1510_YBL051C Saccharomyces mikatae 1510_YBL051C N 0.986
539_YBL051C Saccharomyces paradoxus 539_YBL051C N 1.000
A7TMV9_VANPO Vanderwaltozyma polyspora A7TMV9_VANPO N 0.803
A7TQD0_VANPO Vanderwaltozyma polyspora A7TQD0_VANPO N 0.718
AB09303.1 Alternaria brassicicola AB09303.1 N 0.718
ACLA_003320 Aspergillus clavatus CADACLAG00000413 N 0.704
ACR235W Ashbya gossypii ACR235W N 0.817
AFLA_025070 Aspergillus flavus CADAFLAG00001883 N 0.704
AFUA_5G01940 Aspergillus fumigatus CADAFUAG00002843 N 0.704
An16g01800 Aspergillus niger CADANGAG00012651 N 0.704
ANIA_08038 Aspergillus nidulans CADANIAG00004059 N 0.704
AO090003001325 Aspergillus oryzae CADAORAG00001849 N 0.704
ARB_00840 Arthroderma benhamiae ARB_00840 N 0.718
ATEG_09814 Aspergillus terreus CADATEAG00005663 N 0.704
BDBG_02675 Blastomyces dermatitidis BDBG_02675 N 0.718
CAGL0A04213g Candida glabrata CAGL0A04213g N 0.859
Cd36_26480 Candida dubliniensis Cd36_26480 N 0.746
CIMG_06397 Coccidioides immitis CIMG_06397 N 0.704
CLUG_00283 Candida lusitaniae CLUG_00283 N 0.761
CPAG_02687 Candida parapsilosis CPAG_02687 N 0.746
CPSG_00675 Coccidioides posadasii CPSG_00675 N 0.704
CTRG_00938 Candida tropicalis CTRG_00938 N 0.746
DEHA0A07766g Debaryomyces hansenii DEHA0A07766g N 0.746
EAT83231.2 Phaeosphaeria nodorum EAT83231.2 N 0.718
estExt_fgenesh1_pg.C_chr_8.10303 Pichia stipitis estExt_fgenesh1_pg.C_chr_8.10303 N 0.761
estExt_fgenesh1_pg.C_chr_80368 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80368 N 0.746
estExt_fgenesh1_pm.C_190004 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_190004 N 0.718
e_gw1.5.456.1 Mycosphaerella fijiensis e_gw1.5.456.1 N 0.732
fgenesh1_pm.00168_#_115 Aspergillus carbonarius fgenesh1_pm.00168_#_115 N 0.704
GSTUMT00005304001 Tuber melanosporum GSTUMT00005304001 N 0.732
HCAG_04905 Histoplasma capsulatum HCAG_04905 N 0.718
KLLA0E19845g Kluyveromyces lactis KLLA0E19845g N 0.845
KLTH0B04950g Kluyveromyces thermotolerans KLTH0B04950g N 0.831
Kwal_14810 Kluyveromyces waltii Kwal_14810 N 0.817
LELG_00183 Lodderomyces elongisporus LELG_00183 N 0.746
MCYG_02010 Microsporum canis MCYG_02010 N 0.718
MGYG_04073 Microsporum gypseum MGYG_04073 N 0.718
NFIA_040180 Neosartorya fischeri CADNFIAG00003684 N 0.704
PABG_00017 Paracoccidioides brasiliensis PABG_00017 N 0.718
Pc21g14530 Penicillium chrysogenum Pc21g14530 N 0.704
PGUG_01669 Candida guilliermondii PGUG_01669 N 0.761
PIN4 Candida albicans orf19.2534 N 0.746
PIN4 Saccharomyces cerevisiae YBL051C N 0.986
PMAA_039640 Penicillium marneffei PMAA_039640 N 0.718
PredSwiss_ASS2010_4410.1 Pneumocystis carinii PredSwiss_ASS2010_4410.1 N 0.732
PredSwiss_CON264.2 Pneumocystis carinii PredSwiss_CON264.2 N 0.732
PTRG_00597 Pyrenophora tritici repentis PTRG_00597 N 0.718
SAKL0F11924g Lachancea kluyveri SAKL0F11924g N 0.831
Scas_Contig500.6 Saccharomyces castellii Scas_Contig500.6 N 0.831
SNOG_09039 Stagonospora nodorum SNOG_09039 N 0.718
SS1G_02057 Sclerotinia sclerotiorum SS1G_02057 N 0.704
TEQG_06159 Trichophyton equinum TEQG_06159 N 0.718
TERG_04408 Trichophyton rubrum TERG_04408 N 0.718
TESG_06836 Trichophyton tonsurans TESG_06836 N 0.718
TRV_07498 Trichophyton verrucosum TRV_07498 N 0.718
UREG_04006 Uncinocarpus reesii UREG_04006 N 0.704
XP_002491986.1 Pichia pastoris XP_002491986.1 N 0.746
YALI0D15752g Yarrowia lipolytica YALI0D15752g N 0.789
ZYRO0B02860g Zygosaccharomyces rouxii ZYRO0B02860g N 0.831