CTRG_00938 (Candida tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CTRG_00938 T29104_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CTRT_00938 RRM 189 259

Links

Other RRM family RBPs
Other Candida tropicalis RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB09303.1 Alternaria brassicicola AB09303.1 N 0.732
ARB_00840 Arthroderma benhamiae ARB_00840 N 0.761
ACR235W Ashbya gossypii ACR235W N 0.817
fgenesh1_pm.00168_#_115 Aspergillus carbonarius fgenesh1_pm.00168_#_115 N 0.775
ACLA_003320 Aspergillus clavatus CADACLAG00000413 N 0.761
AFLA_025070 Aspergillus flavus CADAFLAG00001883 N 0.775
AFUA_5G01940 Aspergillus fumigatus CADAFUAG00002843 N 0.775
ANIA_08038 Aspergillus nidulans CADANIAG00004059 N 0.775
An16g01800 Aspergillus niger CADANGAG00012651 N 0.775
AO090003001325 Aspergillus oryzae CADAORAG00001849 N 0.775
ATEG_09814 Aspergillus terreus CADATEAG00005663 N 0.775
BDBG_02675 Blastomyces dermatitidis BDBG_02675 N 0.761
PIN4 Candida albicans orf19.2534 N 0.986
Cd36_26480 Candida dubliniensis Cd36_26480 N 0.986
CAGL0I05082g Candida glabrata CAGL0I05082g N 0.746
CAGL0A04213g Candida glabrata CAGL0A04213g N 0.732
PGUG_01669 Candida guilliermondii PGUG_01669 N 0.958
CLUG_00283 Candida lusitaniae CLUG_00283 N 0.958
CPAG_02687 Candida parapsilosis CPAG_02687 N 1.000
CIMG_06397 Coccidioides immitis CIMG_06397 N 0.746
CPSG_00675 Coccidioides posadasii CPSG_00675 N 0.746
estExt_fgenesh1_pm.C_190004 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_190004 N 0.732
DEHA0A07766g Debaryomyces hansenii DEHA0A07766g N 0.944
HCAG_04905 Histoplasma capsulatum HCAG_04905 N 0.761
KLLA0E19845g Kluyveromyces lactis KLLA0E19845g N 0.831
KLTH0B04950g Kluyveromyces thermotolerans KLTH0B04950g N 0.831
Kwal_14810 Kluyveromyces waltii Kwal_14810 N 0.859
SAKL0F11924g Lachancea kluyveri SAKL0F11924g N 0.887
LELG_00183 Lodderomyces elongisporus LELG_00183 N 0.972
MCYG_02010 Microsporum canis MCYG_02010 N 0.761
MGYG_04073 Microsporum gypseum MGYG_04073 N 0.761
e_gw1.5.456.1 Mycosphaerella fijiensis e_gw1.5.456.1 N 0.718
estExt_fgenesh1_pg.C_chr_80368 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80368 N 0.746
NFIA_040180 Neosartorya fischeri CADNFIAG00003684 N 0.775
PABG_00017 Paracoccidioides brasiliensis PABG_00017 N 0.761
Pc21g14530 Penicillium chrysogenum Pc21g14530 N 0.775
PMAA_039640 Penicillium marneffei PMAA_039640 N 0.761
EAT83231.2 Phaeosphaeria nodorum EAT83231.2 N 0.732
XP_002491986.1 Pichia pastoris XP_002491986.1 N 0.901
estExt_fgenesh1_pg.C_chr_8.10303 Pichia stipitis estExt_fgenesh1_pg.C_chr_8.10303 N 0.972
PTRG_00597 Pyrenophora tritici repentis PTRG_00597 N 0.732
1078_YHR132C Saccharomyces bayanus 1078_YHR132C N 0.746
Scas_Contig500.6 Saccharomyces castellii Scas_Contig500.6 N 0.831
PIN4 Saccharomyces cerevisiae YBL051C N 0.746
Skud_Contig1725.4 Saccharomyces kudriavzevii Skud_Contig1725.4 N 0.746
1510_YBL051C Saccharomyces mikatae 1510_YBL051C N 0.761
539_YBL051C Saccharomyces paradoxus 539_YBL051C N 0.746
cip2 Schizosaccharomyces pombe SPAC12G12.03 N 0.704
SS1G_02057 Sclerotinia sclerotiorum SS1G_02057 N 0.704
SNOG_09039 Stagonospora nodorum SNOG_09039 N 0.732
TEQG_06159 Trichophyton equinum TEQG_06159 N 0.761
TERG_04408 Trichophyton rubrum TERG_04408 N 0.761
TESG_06836 Trichophyton tonsurans TESG_06836 N 0.761
TRV_07498 Trichophyton verrucosum TRV_07498 N 0.761
GSTUMT00005304001 Tuber melanosporum GSTUMT00005304001 N 0.761
UREG_04006 Uncinocarpus reesii UREG_04006 N 0.732
A7TQD0_VANPO Vanderwaltozyma polyspora A7TQD0_VANPO N 0.746
A7TMV9_VANPO Vanderwaltozyma polyspora A7TMV9_VANPO N 0.789
YALI0D15752g Yarrowia lipolytica YALI0D15752g N 0.873
ZYRO0B02860g Zygosaccharomyces rouxii ZYRO0B02860g N 0.845