CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ANIA_09095
(
Aspergillus nidulans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADANIAG00009519
T33652_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANIAP00009519
RRM
250
320
LFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDKRTGDSLQYAFIEFESQKDCEQAYFKMQGVLIDDHRIH
Links
Other
RRM
family RBPs
Other
Aspergillus nidulans
RBPs
182 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DGIL_AUG5s502g5t1
Acyrtosiphon pisum
DGIL_AUG5s502g5t1
N
0.746
AAEL005690
Aedes aegypti
AAEL005690
N
0.789
AAEL005541
Aedes aegypti
AAEL005541
N
0.789
estExt_fgenesh2_kg.C_140159
Agaricus bisporus
estExt_fgenesh2_kg.C_140159
N
0.803
Ame_R008665
Ailuropoda melanoleuca
Ame_R008665
N
0.775
AB03196.1
Alternaria brassicicola
AB03196.1
N
0.944
Aqu1.223583
Amphimedon queenslandica
Aqu1.223583
N
0.789
PPIL4
Anolis carolinensis
ENSACAG00000006936
N
0.775
AGAP008136
Anopheles gambiae
AGAP008136
N
0.817
amel4_ncbi_hmm35613
Apis mellifera
amel4_ncbi_hmm35613
N
0.775
amel4_ncbi_hmm11961
Apis mellifera
amel4_ncbi_hmm11961
N
0.775
ARB_04672
Arthroderma benhamiae
ARB_04672
N
0.944
fgenesh1_pm.00868_#_101
Aspergillus carbonarius
fgenesh1_pm.00868_#_101
N
0.958
ACLA_065360
Aspergillus clavatus
CADACLAG00006149
N
0.958
AFLA_071340
Aspergillus flavus
CADAFLAG00008558
N
0.958
AFUA_7G02170
Aspergillus fumigatus
CADAFUAG00001177
N
0.958
An12g00490
Aspergillus niger
CADANGAG00009498
N
0.958
AO090038000594
Aspergillus oryzae
CADAORAG00009343
N
0.958
ATEG_01850
Aspergillus terreus
CADATEAG00001841
N
0.958
EDO07903.1
Babesia bovis
EDO07903.1
N
0.732
estExt_Genewise1Plus.C_40228
Batrachochytrium dendrobatidis
estExt_Genewise1Plus.C_40228
N
0.761
BDBG_04009
Blastomyces dermatitidis
BDBG_04009
N
0.958
BGIBMGA008977
Bombyx mori
BGIBMGA008977
N
0.803
A6QP53_BOVIN
Bos taurus
ENSBTAG00000016980
N
0.775
BC1G_10007
Botrytis cinerea
BC1G_10007
N
0.930
estExt_fgenesh2_pm.C_1170007
Branchiostoma floridae
estExt_fgenesh2_pm.C_1170007
N
0.761
CBN08292
Caenorhabditis brenneri
CBN08292
N
0.789
CBG12494
Caenorhabditis briggsae
CBG12494
N
0.761
sig-7
Caenorhabditis elegans
F39H2.2
N
0.775
CJA06296
Caenorhabditis japonica
CJA06296
N
0.761
CRE29496
Caenorhabditis remanei
CRE29496
N
0.775
PPIL4
Callithrix jacchus
ENSCJAG00000019613
N
0.750
Q6JDI1_CANFA
Canis familiaris
ENSCAFG00000000379
N
0.775
estExt_Genewise1.C_180101
Capitella teleta
estExt_Genewise1.C_180101
N
0.761
CAOG_07850
Capsaspora owczarzaki
CAOG_07850
N
0.718
PPIL4
Cavia porcellus
ENSCPOG00000014614
N
0.775
CHGG_06839
Chaetomium globosum
CHGG_06839
N
0.845
estExt_fgenesh3_pm.C_240021
Chlorella NC64A
estExt_fgenesh3_pm.C_240021
N
0.704
estExt_fgeneshCV_pg.C_40316
Chlorella vulgaris
estExt_fgeneshCV_pg.C_40316
N
0.704
ENSCING00000006773
Ciona intestinalis
ENSCING00000006773
I
0.746
ENSCSAVG00000010619
Ciona savignyi
ENSCSAVG00000010619
N
0.746
CIMG_07762
Coccidioides immitis
CIMG_07762
N
0.958
CPSG_09333
Coccidioides posadasii
CPSG_09333
N
0.958
e_gw1.4.423.1
Coccomyxa C 169
e_gw1.4.423.1
N
0.704
estExt_fgenesh1_kg.C_170006
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_170006
N
0.944
GLRG_06614
Colletotrichum graminicola
GLRG_06614
N
0.789
estExt_Genewise1Plus.C_61472
Cryphonectria parasitica
estExt_Genewise1Plus.C_61472
N
0.845
CNBG_1409
Cryptococcus neoformans
CNBG_1409
N
0.817
Chro.80276
Cryptosporidium hominis
Chro.80276
N
0.704
CMU_026350
Cryptosporidium muris
CMU_026350
N
0.718
cgd8_2350
Cryptosporidium parvum
cgd8_2350
N
0.704
CpipJ_CPIJ000912
Culex pipiens
CpipJ_CPIJ000912
N
0.789
CPIJ000912
Culex quinquefasciatus
CPIJ000912
N
0.789
ppil4
Danio rerio
ENSDARG00000043854
N
0.761
GF18772
Drosophila ananassae
FBgn0095789
N
0.775
GG12319
Drosophila erecta
FBgn0104609
N
0.761
GH18460
Drosophila grimshawi
FBgn0125927
N
0.775
CG5808
Drosophila melanogaster
FBgn0027617
N
0.761
GI24038
Drosophila mojavensis
FBgn0146761
N
0.775
GL13859
Drosophila persimilis
FBgn0151464
N
0.775
GA26948-RA
Drosophila pseudoobscura
FBgn0248319
N
0.775
GM23461
Drosophila sechellia
FBgn0178328
N
0.761
GD18267
Drosophila simulans
FBgn0189800
N
0.761
GJ23668
Drosophila virilis
FBgn0210765
N
0.775
GK13166
Drosophila willistoni
FBgn0215175
N
0.732
GE10772
Drosophila yakuba
FBgn0228614
N
0.761
PPIL4
Equus caballus
ENSECAG00000021819
N
0.775
PPIL4
Erinaceus europaeus
ENSEEUG00000000959
N
0.761
FGSG_04479
Fusarium graminearum
FGSG_04479
N
0.845
FOXG_13736
Fusarium oxysporum
FOXG_13736
N
0.845
FVEG_11166
Fusarium verticillioides
FVEG_11166
N
0.845
PPIL4
Gallus gallus
ENSGALG00000012364
N
0.789
PPIL4
Gasterosteus aculeatus
ENSGACG00000006639
N
0.775
PPIL4
Gorilla gorilla
ENSGGOG00000009686
N
0.775
83285
Helobdella robusta
83285
N
0.746
fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
0.775
HCAG_04417
Histoplasma capsulatum
HCAG_04417
N
0.958
PPIL4
Homo sapiens
ENSG00000131013
N
0.775
e_gww1.4.788.1
Laccaria bicolor
e_gww1.4.788.1
N
0.789
LOAG_08216
Loa loa
LOAG_08216
N
0.775
gw1.13.70.1
Lottia gigantea
gw1.13.70.1
N
0.761
PPIL4
Loxodonta africana
ENSLAFG00000026804
N
0.775
PPIL4
Macaca mulatta
ENSMMUG00000023067
N
0.775
MGG_10681
Magnaporthe oryzae
MGG_10681
N
0.873
estExt_fgenesh1_kg.C_40083
Melampsora laricis populina
estExt_fgenesh1_kg.C_40083
N
0.775
PPIL4
Meleagris gallopavo
ENSMGAG00000012596
N
0.789
Minc10084
Meloidogyne incognita
Minc10084
N
0.746
PPIL4
Microcebus murinus
ENSMICG00000006287
N
0.775
MCYG_06073
Microsporum canis
MCYG_06073
N
0.958
MGYG_05886
Microsporum gypseum
MGYG_05886
N
0.944
PPIL4
Monodelphis domestica
ENSMODG00000016825
N
0.775
e_gw1.6.80.1
Monosiga brevicollis
e_gw1.6.80.1
N
0.775
estExt_Genewise1Plus.C_40585
Mucor circinelloides
estExt_Genewise1Plus.C_40585
N
0.775
Ppil4
Mus musculus
ENSMUSG00000015757
N
0.775
estExt_Genewise1.C_30053
Myceliophthora thermophila
estExt_Genewise1.C_30053
N
0.831
fgenesh1_pm.C_scaffold_9000117
Mycosphaerella fijiensis
fgenesh1_pm.C_scaffold_9000117
N
0.887
estExt_Genewise1Plus.C_chr_40303
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_40303
N
0.901
PPIL4
Myotis lucifugus
ENSMLUG00000002766
N
0.775
nasonia_NCBI_hmm783174
Nasonia vitripennis
nasonia_NCBI_hmm783174
N
0.789
fgenesh1_pm.sca_11_chr8_3_0000173
Nectria haematococca
fgenesh1_pm.sca_11_chr8_3_0000173
N
0.831
e_gw.42.57.1
Nematostella vectensis
e_gw.42.57.1
N
0.817
NFIA_114890
Neosartorya fischeri
CADNFIAG00010434
N
0.958
NCLIV_045550
Neospora caninum
NCLIV_045550
N
0.704
NCU10166
Neurospora crassa
NCU10166
N
0.845
estExt_Genewise1Plus.C_12820
Neurospora discreta
estExt_Genewise1Plus.C_12820
N
0.845
gw1.1.256.1
Neurospora tetrasperma
gw1.1.256.1
N
0.845
PPIL4
Ochotona princeps
ENSOPRG00000005619
N
0.775
SNAPOd2T00004354001
Oikopleura dioica
SNAPOd2T00004354001
N
0.746
ENSOANG00000001063
Ornithorhynchus anatinus
ENSOANG00000001063
N
0.789
PPIL4
Oryctolagus cuniculus
ENSOCUG00000007696
N
0.775
PPIL4
Oryzias latipes
ENSORLG00000015310
N
0.789
gwEuk.12.143.1
Ostreococcus lucimarinus
gwEuk.12.143.1
N
0.746
EuGene.1200010297
Ostreococcus RCC809
EuGene.1200010297
N
0.704
gw1.12.00.150.1
Ostreococcus tauri
gw1.12.00.150.1
N
0.718
PPIL4
Otolemur garnettii
ENSOGAG00000014153
N
0.775
PPIL4
Pan troglodytes
ENSPTRG00000018692
N
0.775
PABG_01156
Paracoccidioides brasiliensis
PABG_01156
N
0.958
PHUM268300
Pediculus humanus
PHUM268300
N
0.789
Pc21g11960
Penicillium chrysogenum
Pc21g11960
N
0.958
PMAA_010740
Penicillium marneffei
PMAA_010740
N
0.930
EAT81165.2
Phaeosphaeria nodorum
EAT81165.2
N
0.930
e_gww2.22.65.1
Phanerochaete chrysosporium
e_gww2.22.65.1
N
0.817
e_gw1.20.215.1
Phycomyces blakesleeanus
e_gw1.20.215.1
N
0.775
e_gw1.4.2113.1
Pleurotus ostreatus
e_gw1.4.2113.1
N
0.775
PredSwiss_CON599.3
Pneumocystis carinii
PredSwiss_CON599.3
N
0.831
PredSwiss_ASS2010_933.2
Pneumocystis carinii
PredSwiss_ASS2010_933.2
N
0.831
Pa_2_13850
Podospora anserina
Pa_2_13850
N
0.845
estExt_fgenesh3_pg.C_910016
Postia placenta
estExt_fgenesh3_pg.C_910016
N
0.803
PPIL4
Procavia capensis
ENSPCAG00000008203
N
0.775
PPIL4
Pteropus vampyrus
ENSPVAG00000000746
N
0.775
PGTG_14680
Puccinia graminis
PGTG_14680
N
0.746
PGTG_10482
Puccinia graminis
PGTG_10482
N
0.775
PTTG_06854
Puccinia triticina
PTTG_06854
N
0.746
PTRG_04608
Pyrenophora tritici repentis
PTRG_04608
N
0.930
Ppil4
Rattus norvegicus
ENSRNOG00000015552
N
0.775
RO3G_06974
Rhizopus oryzae
RO3G_06974
N
0.775
PTSG_07932
Salpingoeca rosetta
PTSG_07932
N
0.761
Sjc_0091550
Schistosoma japonicum
Sjc_0091550
N
0.775
Smp_165540
Schistosoma mansoni
Smp_165540
N
0.775
fgenesh1_pm.C_scaffold_1000049
Schizophyllum commune
fgenesh1_pm.C_scaffold_1000049
N
0.789
SPOG_01415
Schizosaccharomyces cryophilus
SPOG_01415
N
0.803
SJAG_00470
Schizosaccharomyces japonicus
SJAG_00470
N
0.803
SOCG_02586
Schizosaccharomyces octosporus
SOCG_02586
N
0.789
cyp6
Schizosaccharomyces pombe
SPBC17G9.05
N
0.831
SS1G_00956
Sclerotinia sclerotiorum
SS1G_00956
N
0.775
e_gw1.6.1078.1
Selaginella moellendorfii
e_gw1.6.1078.1
N
0.704
fgenesh2_pm.4_#_1016
Serpula lacrymans
fgenesh2_pm.4_#_1016
N
0.803
PPIL4
Sorex araneus
ENSSARG00000011244
N
0.775
PPIL4
Spermophilus tridecemlineatus
ENSSTOG00000013980
N
0.746
SPPG_03169
Spizellomyces punctatus
SPPG_03169
N
0.789
e_gw1.4.370.1
Sporobolomyces roseus
e_gw1.4.370.1
N
0.704
SNOG_11457
Stagonospora nodorum
SNOG_11457
N
0.930
XP_782627.2
Strongylocentrotus purpuratus
XP_782627.2
N
0.775
XP_001180629.1
Strongylocentrotus purpuratus
XP_001180629.1
N
0.775
XP_001192414.1
Strongylocentrotus purpuratus
XP_001192414.1
N
0.775
XP_787384.2
Strongylocentrotus purpuratus
XP_787384.2
N
0.775
PPIL4
Taeniopygia guttata
ENSTGUG00000010655
N
0.775
PPIL4
Takifugu rubripes
ENSTRUG00000006670
N
0.817
3821.m00489
Tetrahymena thermophila
3821.m00489
N
0.704
PPIL4
Tetraodon nigroviridis
ENSTNIG00000002706
N
0.817
estExt_Genewise1.C_23809
Thielavia terrestris
estExt_Genewise1.C_23809
N
0.803
TGME49_027850
Toxoplasma gondii
TGME49_027850
N
0.718
TGGT1_083150
Toxoplasma gondii
TGGT1_083150
N
0.718
TGVEG_068650
Toxoplasma gondii
TGVEG_068650
N
0.718
estExt_Genewise1Plus.C_11662
Tremella mesenterica
estExt_Genewise1Plus.C_11662
N
0.831
e_gw1.11.236.1
Trichoderma atroviride
e_gw1.11.236.1
N
0.831
estExt_GeneWisePlus.C_270056
Trichoderma reesei
estExt_GeneWisePlus.C_270056
N
0.831
fgenesh1_pm.C_scaffold_3000471
Trichoderma virens
fgenesh1_pm.C_scaffold_3000471
N
0.831
TEQG_07016
Trichophyton equinum
TEQG_07016
N
0.944
TERG_06028
Trichophyton rubrum
TERG_06028
N
0.944
TRV_03115
Trichophyton verrucosum
TRV_03115
N
0.944
fgeneshTA2_pg.C_scaffold_8000290
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_8000290
N
0.761
GSTUMT00009813001
Tuber melanosporum
GSTUMT00009813001
N
0.930
PPIL4
Tursiops truncatus
ENSTTRG00000006014
N
0.775
UREG_02113
Uncinocarpus reesii
UREG_02113
N
0.958
UM03490
Ustilago maydis
UM03490
N
0.789
VDBG_02138
Verticillium albo atrum
VDBG_02138
N
0.803
VDAG_02606
Verticillium dahliae
VDAG_02606
N
0.803
PPIL4
Vicugna pacos
ENSVPAG00000005157
N
0.775
WUBG_04730
Wuchereria bancrofti
WUBG_04730
N
0.775
ppil4
Xenopus tropicalis
ENSXETG00000021385
N
0.775
YALI0E31551g
Yarrowia lipolytica
YALI0E31551g
N
0.704