ENSG00000250177 (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSG00000250177 T37374_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPC4
M042_0.6 		Homo sapiens AAAAAAR RNAcompete
Ray et al.(2013)
RNCMPT00043 		0.731
PABPC1
M349_0.6 		Homo sapiens ACDAAYM SELEX
Cook et al.(2011)
950_7908267 		0.707
PABPC1
M275_0.6 		Homo sapiens AAAAA SELEX
Cook et al.(2011)
24_7908267 		0.707
PABPC1
M146_0.6 		Homo sapiens ARAAAAM RNAcompete
Ray et al.(2013)
RNCMPT00155 		0.707
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000426553 RRM 12 82
ENSP00000426553 RRM 100 168
ENSP00000426553 RRM 192 261
ENSP00000426553 RRM 295 363

Links

Other RRM family RBPs
Other Homo sapiens RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002890939.1 Arabidopsis lyrata scaffold_103602.1 N 0.000
AT1G32360 Arabidopsis thaliana AT1G32360-TAIR-G N 0.000
BRADI3G16360 Brachypodium distachyon BRADI3G16360 N 0.000
BRADI3G16377 Brachypodium distachyon BRADI3G16377 N 0.000
PK04103.1 Cannabis sativa PK04103.1 N 0.000
Cucsa.312990 Cucumis sativus Cucsa.312990 N 0.000
Glyma01g10610.1 Glycine max Glyma01g10610.1 N 0.000
chr4.LjT10E08.110.nc Lotus japonicus chr4.LjT10E08.110.nc N 0.000
MDP0000209929 Malus x domestica MDP0000209929 N 0.000
MDP0000706016 Malus x domestica MDP0000706016 N 0.000
cassava5467.m1 Manihot esculenta cassava5467.m1 N 0.000
cassava25690.m1 Manihot esculenta cassava25690.m1 N 0.000
Medtr8g078060 Medicago truncatula Medtr8g078060 N 0.000
mgf012162m Mimulus guttatus mgf012162m N 0.000
mgf003951m Mimulus guttatus mgf003951m N 0.000
BGIOSIBCE026569 Oryza indica BGIOSIBCE026569 N 0.000
LOC_Os08g06330 Oryza sativa LOC_Os08g06330 N 0.000
estExt_fgenesh1_pg.C_430142 Physcomitrella patens estExt_fgenesh1_pg.C_430142 N 0.000
B9GZ92_POPTR Populus trichocarpa POPTR_0003s09240 N 0.000
B9MU37_POPTR Populus trichocarpa POPTR_0001s02330 N 0.000
ppa008182m Prunus persica ppa008182m N 0.000
30054.m000804 Ricinus communis 30054.m000804 N 0.000
gw1.11.272.1 Selaginella moellendorfii gw1.11.272.1 N 0.000
GSVIVG00013136001 Vitis vinifera GSVIVG00013136001 N 0.000