CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMLUG00000010456
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000010456
T38716_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000009521
RRM
29
96
LLLSNLDFRVSDADIQQLFAEFGPLKQAAVHYDRSGRSLGTAHVHFEGKADALEARKQYNGVPLDVNR
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
76 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL005114
Aedes aegypti
AAEL005114
N
0.000
AAEL015263
Aedes aegypti
AAEL015263
N
0.000
Ame_R000656
Ailuropoda melanoleuca
Ame_R000656
N
0.800
Aqu1.225634
Amphimedon queenslandica
Aqu1.225634
N
0.000
THOC4
Anolis carolinensis
ENSACAG00000010526
N
0.800
AGAP006733
Anopheles gambiae
AGAP006733
N
0.000
amel4_ncbi_hmm10980
Apis mellifera
amel4_ncbi_hmm10980
N
0.729
BGIBMGA005323
Bombyx mori
BGIBMGA005323
N
0.714
THOC4_BOVIN
Bos taurus
ENSBTAG00000008498
N
0.800
e_gw.394.68.1
Branchiostoma floridae
e_gw.394.68.1
N
0.743
e_gw.5.817.1
Branchiostoma floridae
e_gw.5.817.1
N
0.743
ENSCJAG00000021543
Callithrix jacchus
ENSCJAG00000021543
N
0.754
THOC4
Canis familiaris
ENSCAFG00000005877
N
0.800
estExt_Genewise1.C_7200001
Capitella teleta
estExt_Genewise1.C_7200001
N
0.000
THOC4
Cavia porcellus
ENSCPOG00000013710
N
0.800
Q8MY63_CIOSA
Ciona savignyi
ENSCSAVG00000003324
N
0.000
CpipJ_CPIJ007834
Culex pipiens
CpipJ_CPIJ007834
N
0.000
CPIJ007834
Culex quinquefasciatus
CPIJ007834
N
0.000
tho4
Danio rerio
ENSDARG00000077732
N
0.800
PASA_GEN_1400063
Daphnia pulex
PASA_GEN_1400063
N
0.700
GF17326
Drosophila ananassae
FBgn0094344
N
0.000
GG10124
Drosophila erecta
FBgn0102435
N
0.000
GH18594
Drosophila grimshawi
FBgn0126061
N
0.000
Aly
Drosophila melanogaster
FBgn0010774
N
0.000
GI23076
Drosophila mojavensis
FBgn0145803
N
0.000
GL12678
Drosophila persimilis
FBgn0150284
N
0.000
GA10707-RA
Drosophila pseudoobscura
FBgn0070763
N
0.000
GM10513
Drosophila sechellia
FBgn0165460
N
0.000
GD19510
Drosophila simulans
FBgn0191006
N
0.000
GJ22697
Drosophila virilis
FBgn0209801
N
0.000
GK12741
Drosophila willistoni
FBgn0214750
N
0.000
aly
Drosophila yakuba
FBgn0068000
N
0.000
THOC4
Echinops telfairi
ENSETEG00000016596
N
0.800
LOC100055097
Equus caballus
ENSECAG00000018754
N
0.800
THOC4
Erinaceus europaeus
ENSEEUG00000010164
N
0.824
THOC4
Gallus gallus
ENSGALG00000007237
N
0.800
ENSGACG00000018178
Gasterosteus aculeatus
ENSGACG00000018178
N
0.700
THOC4
Gasterosteus aculeatus
ENSGACG00000013328
N
0.743
THOC4
Gorilla gorilla
ENSGGOG00000013935
N
0.800
97663
Helobdella robusta
97663
N
0.000
THOC4
Homo sapiens
ENSG00000183684
N
0.800
XP_002155396.1
Hydra magnipapillata
XP_002155396.1
N
0.000
ISCW001860
Ixodes scapularis
ISCW001860
N
0.700
THOC4
Loxodonta africana
ENSLAFG00000003083
N
0.800
THOC4
Macaca mulatta
ENSMMUG00000012884
N
0.800
ENSMGAG00000005389
Meleagris gallopavo
ENSMGAG00000005389
N
0.800
THOC4
Microcebus murinus
ENSMICG00000017403
N
0.800
THOC4
Monodelphis domestica
ENSMODG00000003030
N
0.800
Thoc4
Mus musculus
ENSMUSG00000025134
N
0.800
Refbp2
Mus musculus
ENSMUSG00000060244
N
0.757
Gm5698
Mus musculus
ENSMUSG00000086151
N
0.743
Gm5699
Mus musculus
ENSMUSG00000087346
N
0.743
ENSMLUG00000009555
Myotis lucifugus
ENSMLUG00000009555
N
0.786
ENSMLUG00000008923
Myotis lucifugus
ENSMLUG00000008923
N
0.985
ENSMLUG00000001244
Myotis lucifugus
ENSMLUG00000001244
N
0.957
ENSMLUG00000007513
Myotis lucifugus
ENSMLUG00000007513
N
0.926
ENSMLUG00000011599
Myotis lucifugus
ENSMLUG00000011599
N
0.971
ENSMLUG00000011212
Myotis lucifugus
ENSMLUG00000011212
N
0.971
ENSMLUG00000010127
Myotis lucifugus
ENSMLUG00000010127
N
0.971
ENSMLUG00000009822
Myotis lucifugus
ENSMLUG00000009822
N
0.971
ENSMLUG00000009247
Myotis lucifugus
ENSMLUG00000009247
N
0.897
ENSMLUG00000007634
Myotis lucifugus
ENSMLUG00000007634
N
0.985
ENSMLUG00000007617
Myotis lucifugus
ENSMLUG00000007617
N
0.941
ENSMLUG00000004992
Myotis lucifugus
ENSMLUG00000004992
N
0.926
ENSMLUG00000004521
Myotis lucifugus
ENSMLUG00000004521
N
0.957
ENSMLUG00000002669
Myotis lucifugus
ENSMLUG00000002669
N
0.971
ENSMLUG00000002626
Myotis lucifugus
ENSMLUG00000002626
N
0.912
ENSMLUG00000013041
Myotis lucifugus
ENSMLUG00000013041
N
0.957
ENSMLUG00000013085
Myotis lucifugus
ENSMLUG00000013085
N
0.971
ENSMLUG00000015043
Myotis lucifugus
ENSMLUG00000015043
N
0.957
ENSMLUG00000016194
Myotis lucifugus
ENSMLUG00000016194
N
0.971
ENSMLUG00000001217
Myotis lucifugus
ENSMLUG00000001217
N
0.957
nasonia_NCBI_hmm488134
Nasonia vitripennis
nasonia_NCBI_hmm488134
N
0.000
THOC4
Oryzias latipes
ENSORLG00000012331
N
0.771
ENSORLG00000001620
Oryzias latipes
ENSORLG00000001620
N
0.000
THOC4
Otolemur garnettii
ENSOGAG00000012409
N
0.800
THOC4
Pan troglodytes
ENSPTRG00000009774
N
0.800
PHUM023420
Pediculus humanus
PHUM023420
N
0.000
ENSPPYG00000008749
Pongo pygmaeus
ENSPPYG00000008749
N
0.800
THOC4
Pteropus vampyrus
ENSPVAG00000017866
N
0.800
Thoc4
Rattus norvegicus
ENSRNOG00000036687
N
0.812
Smp_108820
Schistosoma mansoni
Smp_108820
N
0.729
XP_782040.2
Strongylocentrotus purpuratus
XP_782040.2
N
0.000
XP_001185635.1
Strongylocentrotus purpuratus
XP_001185635.1
N
0.000
THOC4
Takifugu rubripes
ENSTRUG00000008828
N
0.771
ENSTRUG00000003051
Takifugu rubripes
ENSTRUG00000003051
N
0.743
ENSTNIG00000014136
Tetraodon nigroviridis
ENSTNIG00000014136
N
0.735
THOC4
Tetraodon nigroviridis
ENSTNIG00000011595
N
0.771
fgeneshTA2_pg.C_scaffold_2000899
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_2000899
N
0.000
ENSTBEG00000005834
Tupaia belangeri
ENSTBEG00000005834
N
0.800
THOC4
Tursiops truncatus
ENSTTRG00000012275
N
0.800
AAH74336
Xenopus laevis
AAH74336
N
0.800
AAH92013
Xenopus laevis
AAH92013
N
0.800
Q58EA2
Xenopus laevis
Q58EA2
N
0.800
Q6GLW1
Xenopus laevis
Q6GLW1
N
0.800
thoc4
Xenopus tropicalis
ENSXETG00000005391
N
0.800