ELAVL4 (Tarsius syrichta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTSYG00000004130 T42430_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL4
M313_0.6 		Homo sapiens Sequence logo not available CYCUCCYUCYCYC RIP-chip
Cook et al.(2011)
619_19846595 		1.000
ELAVL4
M315_0.6 		Homo sapiens Sequence logo not available UUUUUUUUUWAAA RIP-chip
Cook et al.(2011)
619_19846595.2 		1.000
ELAVL4
M314_0.6 		Homo sapiens Sequence logo not available KUUUGUUUKKUUU RIP-chip
Cook et al.(2011)
619_19846595.1 		1.000
ELAVL2
M330_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
784_7972035 		0.957
ELAVL2
M329_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
783_7972035 		0.957
ELAVL2
M328_0.6 		Homo sapiens MUYCUUUWUWUUY SELEX
Cook et al.(2011)
782_8497264 		0.957
ELAVL1
M327_0.6 		Homo sapiens Sequence logo not available KKNWWDNNNUKNNUUNUNNH RIP-chip
Cook et al.(2011)
714_14981256 		0.774
ELAVL1
M112_0.6 		Homo sapiens UUURKUU RNAcompete
Ray et al.(2013)
RNCMPT00117 		0.774
ELAVL1
M232_0.6 		Homo sapiens UUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00274 		0.774
ELAVL1
M108_0.6 		Homo sapiens UUWGUUU RNAcompete
Ray et al.(2013)
RNCMPT00112 		0.774
ELAVL1
M127_0.6 		Homo sapiens UUKRUUU RNAcompete
Ray et al.(2013)
RNCMPT00136 		0.774
ELAVL1
M031_0.6 		Homo sapiens UUDUUUU RNAcompete
Ray et al.(2013)
RNCMPT00032 		0.774
Rbp9
M124_0.6 		Drosophila melanogaster UUDDGUU RNAcompete
Ray et al.(2013)
RNCMPT00132 		0.736
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTSYP00000003761 RRM 53 123
ENSTSYP00000003761 RRM 139 207
ENSTSYP00000003761 RRM 304 374

Links

Other RRM family RBPs
Other Tarsius syrichta RBPs

191 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R005612 Ailuropoda melanoleuca Ame_R005612 N 0.000
Ame_R012991 Ailuropoda melanoleuca Ame_R012991 N 0.000
CNBP Anolis carolinensis ENSACAG00000013192 N 0.000
CNBP_BOVIN Bos taurus ENSBTAG00000012159 N 0.000
A6ML16_CALJA Callithrix jacchus ENSCJAG00000017430 N 0.000
CNBP Canis familiaris ENSCAFG00000004320 N 0.000
ZCCHC13 Cavia porcellus ENSCPOG00000004667 N 0.000
CNBP Cavia porcellus ENSCPOG00000012816 N 0.000
ENSCHOG00000003279 Choloepus hoffmanni ENSCHOG00000003279 N 0.000
zff9 Danio rerio ENSDARG00000045776 N 0.000
cnbp Danio rerio ENSDARG00000070922 N 0.000
Cnbp Dipodomys ordii ENSDORG00000002919 N 0.000
ENSDORG00000019792 Dipodomys ordii ENSDORG00000019792 N 0.000
ENSDORG00000019854 Dipodomys ordii ENSDORG00000019854 N 0.000
ENSETEG00000008408 Echinops telfairi ENSETEG00000008408 N 0.000
ENSETEG00000001978 Echinops telfairi ENSETEG00000001978 N 0.000
LOC100050146 Equus caballus ENSECAG00000009512 N 0.000
CNBP Felis catus ENSFCAG00000008665 N 0.000
CNBP_CHICK Gallus gallus ENSGALG00000005001 N 0.000
CNBP Gorilla gorilla ENSGGOG00000010085 N 0.000
CNBP Homo sapiens ENSG00000169714 N 0.000
CNBP Loxodonta africana ENSLAFG00000002502 N 0.000
CNBP Macaca mulatta ENSMMUG00000011585 N 0.000
CNBP Macropus eugenii ENSMEUG00000011699 N 0.000
CNBP Monodelphis domestica ENSMODG00000008362 N 0.000
Zcchc13 Mus musculus ENSMUSG00000031330 N 0.000
Cnbp Mus musculus ENSMUSG00000030057 N 0.000
CNBP Myotis lucifugus ENSMLUG00000012554 N 0.000
CNBP Ochotona princeps ENSOPRG00000005487 N 0.000
CNBP Ornithorhynchus anatinus ENSOANG00000000585 N 0.000
ZCCHC13 Oryctolagus cuniculus ENSOCUG00000008008 N 0.000
CNBP Oryctolagus cuniculus ENSOCUG00000008696 N 0.000
ZCCHC13 Oryzias latipes ENSORLG00000011453 N 0.000
CNBP Otolemur garnettii ENSOGAG00000005144 N 0.000
CNBP Pan troglodytes ENSPTRG00000015369 N 0.000
ENSPPYG00000013423 Pongo pygmaeus ENSPPYG00000013423 N 0.000
CNBP Procavia capensis ENSPCAG00000011572 N 0.000
CNBP Pteropus vampyrus ENSPVAG00000015070 N 0.000
Cnbp Rattus norvegicus ENSRNOG00000010239 N 0.000
CNBP Sorex araneus ENSSARG00000011874 N 0.000
CNBP Spermophilus tridecemlineatus ENSSTOG00000000173 N 0.000
ZCCHC13 Sus scrofa ENSSSCG00000012417 N 0.000
CNBP Taeniopygia guttata ENSTGUG00000004001 N 0.000
ZCCHC13 Takifugu rubripes ENSTRUG00000007258 N 0.000
CNBP Tarsius syrichta ENSTSYG00000004344 N 0.000
CNBP Tursiops truncatus ENSTTRG00000015266 N 0.000
CNBP Vicugna pacos ENSVPAG00000007138 N 0.000
AAA81168 Xenopus laevis AAA81168 N 0.000
AAI69746 Xenopus laevis AAI69746 N 0.000
cnbp Xenopus tropicalis ENSXETG00000025147 N 0.000