CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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83285
(
Helobdella robusta
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
83285
T48882_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
83285
RRM
243
313
LFVCKLNPVTTEEDLEVIFSRFGPITSCEVIKDYKTQESLQYAFIEFQNTEDCEKAYFKMDNVLIDDRRIH
Links
Other
RRM
family RBPs
Other
Helobdella robusta
RBPs
179 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GF11890
Drosophila ananassae
FBgn0088930
N
0.000
GG22189
Drosophila erecta
FBgn0114363
N
0.000
GH21366
Drosophila grimshawi
FBgn0128828
N
0.000
qkr58E-2
Drosophila melanogaster
FBgn0022985
N
0.000
GI20561
Drosophila mojavensis
FBgn0143297
N
0.000
GL11428
Drosophila persimilis
FBgn0149037
N
0.000
GL17545
Drosophila persimilis
FBgn0155148
N
0.000
GA19155-RA
Drosophila pseudoobscura
FBgn0079152
N
0.000
GA18453-RA
Drosophila pseudoobscura
FBgn0078455
N
0.000
GM15910
Drosophila sechellia
FBgn0170826
N
0.000
GD11668
Drosophila simulans
FBgn0183408
N
0.000
GJ22415
Drosophila virilis
FBgn0209527
N
0.000
GK20819
Drosophila willistoni
FBgn0222815
N
0.000