Aqu1.200557 (Amphimedon queenslandica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Aqu1.200557 T48920_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.200557 RRM 52 122

Links

Other RRM family RBPs
Other Amphimedon queenslandica RBPs

107 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s13597g2t1 Acyrtosiphon pisum DGIL_AUG5s13597g2t1 N 0.761
AAEL002461 Aedes aegypti AAEL002461 N 0.775
Ame_R006638 Ailuropoda melanoleuca Ame_R006638 N 0.819
Aqu1.228439 Amphimedon queenslandica Aqu1.228439 N 0.986
RBMX2 Anolis carolinensis ENSACAG00000008819 N 0.819
AGAP000977 Anopheles gambiae AGAP000977 N 0.803
estExt_fgenesh1_pg.C_30395 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_30395 N 0.704
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.704
LOC613705 Bos taurus ENSBTAG00000014771 N 0.761
LOC534630 Bos taurus ENSBTAG00000006252 N 0.761
estExt_fgenesh2_pg.C_1800064 Branchiostoma floridae estExt_fgenesh2_pg.C_1800064 N 0.775
Bm1_02690 Brugia malayi Bm1_02690 N 0.789
CBN24057 Caenorhabditis brenneri CBN24057 N 0.704
CBG02589 Caenorhabditis briggsae CBG02589 N 0.718
C30B5.4 Caenorhabditis elegans C30B5.4 N 0.732
CJA10629 Caenorhabditis japonica CJA10629 N 0.704
CRE26315 Caenorhabditis remanei CRE26315 N 0.732
LOC100388331 Callithrix jacchus ENSCJAG00000002436 N 0.819
RBMX2 Canis familiaris ENSCAFG00000018770 N 0.797
gw1.462.53.1 Capitella teleta gw1.462.53.1 N 0.775
CAOG_00327 Capsaspora owczarzaki CAOG_00327 N 0.718
RBMX2 Cavia porcellus ENSCPOG00000006640 N 0.833
e_gwW.26.138.1 Chlamydomonas reinhardtii e_gwW.26.138.1 N 0.732
ENSCSAVG00000001047 Ciona savignyi ENSCSAVG00000001047 N 0.732
CpipJ_CPIJ015641 Culex pipiens CpipJ_CPIJ015641 N 0.703
CPIJ015641 Culex quinquefasciatus CPIJ015641 N 0.703
rbmx2 Danio rerio ENSDARG00000044380 N 0.817
estExt_Genewise1Plus.C_110324 Daphnia pulex estExt_Genewise1Plus.C_110324 N 0.775
e_gw1.132.52.1 Dictyostelium purpureum e_gw1.132.52.1 N 0.704
GF14433 Drosophila ananassae FBgn0091460 N 0.732
GG21207 Drosophila erecta FBgn0113387 N 0.718
GH13830 Drosophila grimshawi FBgn0121306 N 0.718
CG10466 Drosophila melanogaster FBgn0032822 N 0.718
GI11259 Drosophila mojavensis FBgn0134020 N 0.732
GI11260 Drosophila mojavensis FBgn0134021 N 0.732
GI20215 Drosophila mojavensis FBgn0142951 N 0.732
GL26176 Drosophila persimilis FBgn0163758 N 0.718
GA10331-RA Drosophila pseudoobscura FBgn0070389 N 0.718
GM17378 Drosophila sechellia FBgn0172288 N 0.718
GD24233 Drosophila simulans FBgn0195582 N 0.718
GJ13600 Drosophila virilis FBgn0200822 N 0.746
GK14925 Drosophila willistoni FBgn0216930 N 0.746
GE13281 Drosophila yakuba FBgn0230967 N 0.718
RBMX2 Echinops telfairi ENSETEG00000001763 N 0.819
LOC100058600 Equus caballus ENSECAG00000008257 N 0.819
RBMX2 Erinaceus europaeus ENSEEUG00000000839 N 0.764
RBMX2 Gallus gallus ENSGALG00000004025 N 0.806
RBMX2 Gasterosteus aculeatus ENSGACG00000001855 N 0.789
ENSGGOG00000026106 Gorilla gorilla ENSGGOG00000026106 N 0.778
RBMX2 Gorilla gorilla ENSGGOG00000023687 N 0.819
ENSGGOG00000016146 Gorilla gorilla ENSGGOG00000016146 N 0.806
145168 Helobdella robusta 145168 N 0.718
RBMX2 Homo sapiens ENSG00000134597 N 0.819
XP_002164481.1 Hydra magnipapillata XP_002164481.1 N 0.859
LOAG_03303 Loa loa LOAG_03303 N 0.703
fgenesh2_pg.C_sca_10000115 Lottia gigantea fgenesh2_pg.C_sca_10000115 N 0.775
RBMX2 Loxodonta africana ENSLAFG00000017625 N 0.757
ENSLAFG00000028277 Loxodonta africana ENSLAFG00000028277 N 0.831
ENSMMUG00000001001 Macaca mulatta ENSMMUG00000001001 N 0.736
RBMX2 Macaca mulatta ENSMMUG00000008389 N 0.819
XP_001110036.1 Macaca mulatta ENSMMUG00000020845 N 0.833
RBMX2 Macropus eugenii ENSMEUG00000010913 N 0.819
RBMX2 Meleagris gallopavo ENSMGAG00000001801 N 0.778
RBMX2 Microcebus murinus ENSMICG00000015139 N 0.819
gw1.1.945.1 Micromonas pusilla gw1.1.945.1 N 0.732
ENSMODG00000011981 Monodelphis domestica ENSMODG00000011981 N 0.704
XM_001377711.1 Monodelphis domestica ENSMODG00000012002 N 0.806
ENSMODG00000019800 Monodelphis domestica ENSMODG00000019800 N 0.806
estExt_fgenesh1_pg.C_410012 Monosiga brevicollis estExt_fgenesh1_pg.C_410012 N 0.803
Rbmx2 Mus musculus ENSMUSG00000031107 N 0.806
ENSMLUG00000010298 Myotis lucifugus ENSMLUG00000010298 N 0.819
ENSMLUG00000017095 Myotis lucifugus ENSMLUG00000017095 N 0.831
e_gw1.1.588.1 Naegleria gruberi e_gw1.1.588.1 N 0.704
nasonia_NCBI_hmm382923 Nasonia vitripennis nasonia_NCBI_hmm382923 N 0.817
gw.130.169.1 Nematostella vectensis gw.130.169.1 N 0.803
SNAPOd2T00025973001 Oikopleura dioica SNAPOd2T00025973001 N 0.718
RBMX2 Ornithorhynchus anatinus ENSOANG00000001362 N 0.784
ENSOCUG00000020937 Oryctolagus cuniculus ENSOCUG00000020937 N 0.743
RBMX2 Oryctolagus cuniculus ENSOCUG00000011809 N 0.808
RBMX2 Oryzias latipes ENSORLG00000013183 N 0.845
ENSOGAG00000006237 Otolemur garnettii ENSOGAG00000006237 N 0.819
ENSOGAG00000009060 Otolemur garnettii ENSOGAG00000009060 N 0.764
XR_023755.1 Pan troglodytes ENSPTRG00000022269 N 0.778
GSPATP00026936001 Paramecium tetraurelia GSPATP00026936001 N 0.704
PHUM617480 Pediculus humanus PHUM617480 N 0.732
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.746
ENSPPYG00000020717 Pongo pygmaeus ENSPPYG00000020717 N 0.778
RBMX2 Procavia capensis ENSPCAG00000012903 N 0.764
RBMX2 Pteropus vampyrus ENSPVAG00000004425 N 0.819
Rbmx2 Rattus norvegicus ENSRNOG00000007371 N 0.806
Sjc_0109550 Schistosoma japonicum Sjc_0109550 N 0.730
Smp_170230 Schistosoma mansoni Smp_170230 N 0.730
RBMX2 Sorex araneus ENSSARG00000007350 N 0.817
RBMX2 Spermophilus tridecemlineatus ENSSTOG00000015391 N 0.819
XP_001180915.1 Strongylocentrotus purpuratus XP_001180915.1 N 0.845
XP_791635.2 Strongylocentrotus purpuratus XP_791635.2 N 0.845
RBMX2 Taeniopygia guttata ENSTGUG00000005239 N 0.708
RBMX2 Takifugu rubripes ENSTRUG00000001699 N 0.817
RBMX2 Tarsius syrichta ENSTSYG00000010611 N 0.775
3703.m00181 Tetrahymena thermophila 3703.m00181 N 0.718
RBMX2 Tetraodon nigroviridis ENSTNIG00000007672 N 0.803
TA19570 Theileria annulata TA19570 N 0.704
TP01_0238 Theileria parva TP01_0238 N 0.704
gw1.1.2244.1 Trichoplax adhaerens gw1.1.2244.1 N 0.732
RBMX2 Tursiops truncatus ENSTTRG00000016210 N 0.819
e_gw1.98.15.1 Volvox carteri e_gw1.98.15.1 N 0.775
WUBG_13107 Wuchereria bancrofti WUBG_13107 N 0.789