GRMZM2G177001 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G177001 T54196_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G177001_P01 RRM 38 107
GRMZM2G177001_P01 RRM 126 197
GRMZM2G177001_P01 RRM 372 442
GRMZM2G177001_P02 RRM 38 107
GRMZM2G177001_P02 RRM 126 197
GRMZM2G177001_P02 RRM 372 415

Links

Other RRM family RBPs
Other Zea mays RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002872750.1 Arabidopsis lyrata fgenesh2_kg.6__3385__AT4G03110.1 N 0.748
AtRBP-DR1 Arabidopsis thaliana AT4G03110-TAIR-G N 0.743
BRADI2G27260 Brachypodium distachyon BRADI2G27260 N 0.897
BRADI2G60300 Brachypodium distachyon BRADI2G60300 N 0.836
PK12631.1 Cannabis sativa PK12631.1 N 0.798
Cucsa.084710 Cucumis sativus Cucsa.084710 N 0.756
Glyma02g17090.1 Glycine max Glyma02g17090.1 N 0.770
Glyma03g36650.1 Glycine max Glyma03g36650.1 N 0.798
Glyma10g02700.1 Glycine max Glyma10g02700.1 N 0.765
Glyma19g39300.1 Glycine max Glyma19g39300.1 N 0.789
MDP0000123673 Malus x domestica MDP0000123673 N 0.765
MDP0000138865 Malus x domestica MDP0000138865 N 0.776
cassava29564.valid.m1 Manihot esculenta cassava29564.valid.m1 N 0.784
cassava24659.valid.m1 Manihot esculenta cassava24659.valid.m1 N 0.793
mgf007780m Mimulus guttatus mgf007780m N 0.756
mgf010250m Mimulus guttatus mgf010250m N 0.734
BGIOSIBCE018791 Oryza indica BGIOSIBCE018791 N 0.854
LOC_Os05g30980 Oryza sativa LOC_Os05g30980 N 0.878
LOC_Os01g71200 Oryza sativa LOC_Os01g71200 N 0.854
B9I9Y4_POPTR Populus trichocarpa POPTR_0014s13070 N 0.793
B9GTC1_POPTR Populus trichocarpa POPTR_0002s22730 N 0.779
ppa006027m Prunus persica ppa006027m N 0.793
29647.m002041 Ricinus communis 29647.m002041 N 0.789
Sb03g045340 Sorghum bicolor Sb03g045340 N 0.854
SB09G018610 Sorghum bicolor Sb09g018610 N 0.972
GSVIVG00011013001 Vitis vinifera GSVIVG00011013001 N 0.822
GRMZM2G005459 Zea mays GRMZM2G005459 N 0.831