XP_002156010.1 (Hydra magnipapillata)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		XP_002156010.1 T01142_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_002156010.1 CCCH ZF 1 24
XP_002156010.1 RRM 72 130
XP_002156010.1 CCCH ZF 138 164

Links

Other CCCH ZF,RRM family RBPs
Other Hydra magnipapillata RBPs

94 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_002167624.1 Hydra magnipapillata XP_002167624.1 N 0.927
e_gw.121.26.1 Nematostella vectensis e_gw.121.26.1 N 0.903
U2AF1 Vicugna pacos ENSVPAG00000002856 N 0.882
U2AF1 Spermophilus tridecemlineatus ENSSTOG00000012766 N 0.882
U2AF1 Pteropus vampyrus ENSPVAG00000016992 N 0.882
U2af1 Dipodomys ordii ENSDORG00000000211 N 0.882
U2AF1 Tupaia belangeri ENSTBEG00000000453 N 0.882
U2AF1 Myotis lucifugus ENSMLUG00000014756 N 0.882
U2AF1 Ornithorhynchus anatinus ENSOANG00000006463 N 0.874
LOC100057570 Equus caballus ENSECAG00000015558 N 0.874
Ame_R019749 Ailuropoda melanoleuca Ame_R019749 N 0.874
U2AF1 Meleagris gallopavo ENSMGAG00000014587 N 0.874
e_gw.8.587.1 Branchiostoma floridae e_gw.8.587.1 N 0.868
e_gw.8.588.1 Branchiostoma floridae e_gw.8.588.1 N 0.868
AAI08559 Xenopus laevis AAI08559 N 0.867
u2af1 Danio rerio ENSDARG00000015325 N 0.867
U2AF1 Homo sapiens ENSG00000160201 N 0.858
U2AF1 Microcebus murinus ENSMICG00000013835 N 0.858
U2AF1 Echinops telfairi ENSETEG00000002200 N 0.858
Q98TR0_CHICK Gallus gallus ENSGALG00000016198 N 0.858
U2AF1 Monodelphis domestica ENSMODG00000021029 N 0.858
U2af1 Mus musculus ENSMUSG00000061613 N 0.858
U2AF1 Loxodonta africana ENSLAFG00000011460 N 0.858
ENSGACG00000003454 Gasterosteus aculeatus ENSGACG00000003454 N 0.858
U2AF1 Oryzias latipes ENSORLG00000006182 N 0.858
U2AF1 Anolis carolinensis ENSACAG00000017836 N 0.858
U2AF1 Taeniopygia guttata ENSTGUG00000005826 N 0.858
U2AF1 Tetraodon nigroviridis ENSTNIG00000008311 N 0.858
U2AF1 Tarsius syrichta ENSTSYG00000006799 N 0.858
U2AF1 Pan troglodytes ENSPTRG00000013952 N 0.858
U2AF1_BOVIN Bos taurus ENSBTAG00000011645 N 0.858
LOC100415206 Callithrix jacchus ENSCJAG00000015843 N 0.858
U2AF1 Cavia porcellus ENSCPOG00000004893 N 0.858
U2AF1 Canis familiaris ENSCAFG00000010572 N 0.858
U2AF1 Macaca mulatta ENSMMUG00000022769 N 0.858
ENSCSAVG00000000329 Ciona savignyi ENSCSAVG00000000329 N 0.851
XP_001191705.1 Strongylocentrotus purpuratus XP_001191705.1 N 0.851
U2AF1 Gasterosteus aculeatus ENSGACG00000014605 N 0.850
U2AF1L4 Oryctolagus cuniculus ENSOCUG00000013434 N 0.833
U2AF1L4 Sus scrofa ENSSSCG00000002896 N 0.833
U2af1l4 Rattus norvegicus ENSRNOG00000024497 N 0.833
U2AF1L4 Monodelphis domestica ENSMODG00000014003 N 0.833
U2af1l4 Mus musculus ENSMUSG00000078765 N 0.833
U2AF4_BOVIN Bos taurus ENSBTAG00000023610 N 0.833
ENSCING00000004086 Ciona intestinalis ENSCING00000004086 N 0.833
U2AF1L4 Equus caballus ENSECAG00000017941 N 0.833
U2AF1L4 Loxodonta africana ENSLAFG00000012923 N 0.833
BGIBMGA010333 Bombyx mori BGIBMGA010333 N 0.832
nasonia_NCBI_hmm622923 Nasonia vitripennis nasonia_NCBI_hmm622923 N 0.832
U2AF1 Procavia capensis ENSPCAG00000013413 N 0.832
PHUM349680 Pediculus humanus PHUM349680 N 0.832
e_gw1.49.82.1 Lottia gigantea e_gw1.49.82.1 N 0.828
estExt_Genewise1.C_3650003 Capitella teleta estExt_Genewise1.C_3650003 N 0.825
e_gw1.30.183.1 Daphnia pulex e_gw1.30.183.1 N 0.823
U2AF1 Takifugu rubripes ENSTRUG00000013815 N 0.823
ENSORLG00000008857 Oryzias latipes ENSORLG00000008857 N 0.823
amel4_ncbi_hmm38272 Apis mellifera amel4_ncbi_hmm38272 N 0.823
U2AF1L4 Gorilla gorilla ENSGGOG00000016828 N 0.816
Aqu1.219575 Amphimedon queenslandica Aqu1.219575 N 0.816
AAEL006713 Aedes aegypti AAEL006713 N 0.814
CPIJ016711 Culex quinquefasciatus CPIJ016711 N 0.814
CPIJ003901 Culex quinquefasciatus CPIJ003901 N 0.814
AGAP002956 Anopheles gambiae AGAP002956 N 0.814
CpipJ_CPIJ003901 Culex pipiens CpipJ_CPIJ003901 N 0.814
CpipJ_CPIJ016711 Culex pipiens CpipJ_CPIJ016711 N 0.814
U2AF1L4 Homo sapiens ENSG00000161265 N 0.807
GD22967 Drosophila simulans FBgn0194360 N 0.805
GM16679 Drosophila sechellia FBgn0171592 N 0.805
GJ17240 Drosophila virilis FBgn0204416 N 0.805
GL25824 Drosophila persimilis FBgn0163408 N 0.805
GK14823 Drosophila willistoni FBgn0216828 N 0.805
GE16227 Drosophila yakuba FBgn0233767 N 0.805
GF24893 Drosophila ananassae FBgn0101885 N 0.805
GI15018 Drosophila mojavensis FBgn0137768 N 0.805
GA17536-RA Drosophila pseudoobscura FBgn0077547 N 0.805
U2af38 Drosophila melanogaster FBgn0017457 N 0.805
GG24659 Drosophila erecta FBgn0116791 N 0.805
GH10217 Drosophila grimshawi FBgn0117698 N 0.805
184981 Helobdella robusta 184981 N 0.798
e_gw1.35.104.1 Trichoplax adhaerens e_gw1.35.104.1 N 0.797
ENSGGOG00000025487 Gorilla gorilla ENSGGOG00000025487 N 0.795
PTSG_08923 Salpingoeca rosetta PTSG_08923 N 0.788
U2AF1L4 Pan troglodytes ENSPTRG00000010860 N 0.773
Smp_093100 Schistosoma mansoni Smp_093100 N 0.752
SPPG_02695 Spizellomyces punctatus SPPG_02695 N 0.739
ENSGGOG00000000469 Gorilla gorilla ENSGGOG00000000469 N 0.730
Q9YHU4_FUGRU Takifugu rubripes ENSTRUG00000010538 N 0.727
ENSTNIG00000013914 Tetraodon nigroviridis ENSTNIG00000013914 N 0.727
ISCW019664 Ixodes scapularis ISCW019664 N 0.724
Sjc_0045900 Schistosoma japonicum Sjc_0045900 N 0.722
WUBG_02195 Wuchereria bancrofti WUBG_02195 N 0.716
LOAG_00486 Loa loa LOAG_00486 N 0.716
Bm1_55710 Brugia malayi Bm1_55710 N 0.716
DGIL_AUG5s4512g5t1 Acyrtosiphon pisum DGIL_AUG5s4512g5t1 N 0.702