ENSOGAG00000009877 (Otolemur garnettii)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSOGAG00000009877 T03086_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000008832 CCCH ZF 1 19
ENSOGAP00000008832 CCCH ZF 23 43
ENSOGAP00000008832 CCCH ZF 147 172
ENSOGAP00000008832 CCCH ZF 305 330

Links

Other CCCH ZF family RBPs
Other Otolemur garnettii RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MKRN1 Tarsius syrichta ENSTSYG00000009996 N 0.989
MKRN1 Sorex araneus ENSSARG00000013683 N 0.957
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.928
MKRN1 Felis catus ENSFCAG00000013043 N 0.928
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.918
LOC100065893 Equus caballus ENSECAG00000017929 N 0.918
ENSPPYG00000018057 Pongo pygmaeus ENSPPYG00000018057 N 0.918
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.908
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.908
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.897
MKRN1 Homo sapiens ENSG00000133606 N 0.897
ENSCPOG00000000948 Cavia porcellus ENSCPOG00000000948 N 0.890
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 0.865
MKRN1 Sus scrofa ENSSSCG00000016498 N 0.865
MKRN1 Tursiops truncatus ENSTTRG00000009528 N 0.865
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 0.856
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.846
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.846
MKRN1 Procavia capensis ENSPCAG00000014683 N 0.845
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.837
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.837
MKRN1 Meleagris gallopavo ENSMGAG00000013208 N 0.806
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.798
MKRN1 Taeniopygia guttata ENSTGUG00000011669 N 0.786
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.779
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.779
Q9PTI4_CHICK Gallus gallus ENSGALG00000012852 N 0.769
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.769
ENSPPYG00000020255 Pongo pygmaeus ENSPPYG00000020255 N 0.769
MKRN1 Callithrix jacchus ENSCJAG00000004068 N 0.721
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.712