MKRN1 (Procavia capensis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSPCAG00000014683 T03185_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000013697 CCCH ZF 1 19
ENSPCAP00000013697 CCCH ZF 25 48
ENSPCAP00000013697 CCCH ZF 147 172
ENSPCAP00000013697 CCCH ZF 305 330

Links

Other CCCH ZF family RBPs
Other Procavia capensis RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.918
ENSPPYG00000018057 Pongo pygmaeus ENSPPYG00000018057 N 0.918
MKRN1 Felis catus ENSFCAG00000013043 N 0.918
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.908
LOC100065893 Equus caballus ENSECAG00000017929 N 0.908
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.908
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.907
ENSCPOG00000000948 Cavia porcellus ENSCPOG00000000948 N 0.900
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.898
MKRN1 Homo sapiens ENSG00000133606 N 0.897
MKRN1 Meleagris gallopavo ENSMGAG00000013208 N 0.875
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.863
MKRN1 Sus scrofa ENSSSCG00000016498 N 0.856
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.856
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 0.856
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 0.856
MKRN1 Tursiops truncatus ENSTTRG00000009528 N 0.856
MKRN1 Tarsius syrichta ENSTSYG00000009996 N 0.856
MKRN1 Taeniopygia guttata ENSTGUG00000011669 N 0.854
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.853
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.853
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.853
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.846
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.846
ENSOGAG00000009877 Otolemur garnettii ENSOGAG00000009877 N 0.845
MKRN1 Sorex araneus ENSSARG00000013683 N 0.838
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.837
Q9PTI4_CHICK Gallus gallus ENSGALG00000012852 N 0.833
ENSPPYG00000020255 Pongo pygmaeus ENSPPYG00000020255 N 0.796
AAH74368 Xenopus laevis AAH74368 N 0.792
Q6GLT5 Xenopus laevis Q6GLT5 N 0.792
MKRN1 Callithrix jacchus ENSCJAG00000004068 N 0.757
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.755
MKRN1 Oryzias latipes ENSORLG00000012765 N 0.724
mkrn1 Danio rerio ENSDARG00000041665 N 0.717
MKRN1 Gasterosteus aculeatus ENSGACG00000019227 N 0.702