MKRN1 (Tursiops truncatus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSTTRG00000009528 T03589_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000009027 CCCH ZF 15 40
ENSTTRP00000009027 CCCH ZF 44 69
ENSTTRP00000009027 CCCH ZF 168 193
ENSTTRP00000009027 CCCH ZF 326 351

Links

Other CCCH ZF family RBPs
Other Tursiops truncatus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 1.000
MKRN1 Sus scrofa ENSSSCG00000016498 N 1.000
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.990
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 0.990
MKRN1 Homo sapiens ENSG00000133606 N 0.990
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.981
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.981
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.971
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.962
ENSCPOG00000000948 Cavia porcellus ENSCPOG00000000948 N 0.942
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.942
LOC100065893 Equus caballus ENSECAG00000017929 N 0.942
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.933
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.933
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.933
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.933
MKRN1 Felis catus ENSFCAG00000013043 N 0.933
ENSPPYG00000018057 Pongo pygmaeus ENSPPYG00000018057 N 0.923
ENSPPYG00000020255 Pongo pygmaeus ENSPPYG00000020255 N 0.894
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.885
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.885
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.885
MKRN1 Tarsius syrichta ENSTSYG00000009996 N 0.875
Q9PTI4_CHICK Gallus gallus ENSGALG00000012852 N 0.875
MKRN1 Sorex araneus ENSSARG00000013683 N 0.865
ENSOGAG00000009877 Otolemur garnettii ENSOGAG00000009877 N 0.865
MKRN1 Procavia capensis ENSPCAG00000014683 N 0.856
MKRN1 Callithrix jacchus ENSCJAG00000004068 N 0.846
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.837
MKRN1 Meleagris gallopavo ENSMGAG00000013208 N 0.808
MKRN1 Oryzias latipes ENSORLG00000012765 N 0.800
Q6GLT5 Xenopus laevis Q6GLT5 N 0.788
AAH74368 Xenopus laevis AAH74368 N 0.788
MKRN1 Taeniopygia guttata ENSTGUG00000011669 N 0.788
mkrn1 Danio rerio ENSDARG00000041665 N 0.774
MKRN1 Gasterosteus aculeatus ENSGACG00000019227 N 0.755
NP_001072050.1 Takifugu rubripes ENSTRUG00000012057 N 0.745
MKRN1 Tetraodon nigroviridis ENSTNIG00000007231 N 0.736